Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH11YQ9BZA8 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH11YQ9BZA8 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC19■□□□□ 0.63
PCDH11YQ9BZA8 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDH11YQ9BZA8 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH11YQ9BZA8 IL9RP3-201ENST00000442856 1674 ntBASIC19■□□□□ 0.63
PCDH11YQ9BZA8 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH11YQ9BZA8 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDH11YQ9BZA8 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH11YQ9BZA8 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDH11YQ9BZA8 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC19■□□□□ 0.63
PCDH11YQ9BZA8 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC19■□□□□ 0.63
PCDH11YQ9BZA8 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH11YQ9BZA8 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH11YQ9BZA8 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC19■□□□□ 0.63
PCDH11YQ9BZA8 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH11YQ9BZA8 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
PCDH11YQ9BZA8 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDH11YQ9BZA8 AC092580.1-201ENST00000433998 658 ntBASIC19■□□□□ 0.63
PCDH11YQ9BZA8 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC19■□□□□ 0.63
PCDH11YQ9BZA8 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDH11YQ9BZA8 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC19■□□□□ 0.63
PCDH11YQ9BZA8 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC19■□□□□ 0.63
PCDH11YQ9BZA8 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC19■□□□□ 0.63
PCDH11YQ9BZA8 AC008894.3-201ENST00000624324 3103 ntBASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 AL162727.3-201ENST00000635661 2787 ntBASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 SF1-209ENST00000433274 2317 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 AL357563.1-201ENST00000404728 395 ntBASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 AC073869.2-201ENST00000417338 1026 ntBASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 AC004837.1-201ENST00000446267 564 ntBASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 NEU3-207ENST00000534628 746 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 CR383656.3-201ENST00000551315 183 ntBASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDH11YQ9BZA8 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH11YQ9BZA8 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH11YQ9BZA8 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDH11YQ9BZA8 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH11YQ9BZA8 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDH11YQ9BZA8 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH11YQ9BZA8 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH11YQ9BZA8 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PCDH11YQ9BZA8 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH11YQ9BZA8 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDH11YQ9BZA8 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH11YQ9BZA8 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDH11YQ9BZA8 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDH11YQ9BZA8 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PCDH11YQ9BZA8 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH11YQ9BZA8 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PCDH11YQ9BZA8 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PCDH11YQ9BZA8 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDH11YQ9BZA8 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH11YQ9BZA8 LCK-206ENST00000373564 2137 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDH11YQ9BZA8 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH11YQ9BZA8 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH11YQ9BZA8 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH11YQ9BZA8 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH11YQ9BZA8 MIR645-201ENST00000385283 94 ntBASIC18.98■□□□□ 0.63
PCDH11YQ9BZA8 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDH11YQ9BZA8 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH11YQ9BZA8 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH11YQ9BZA8 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
PCDH11YQ9BZA8 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDH11YQ9BZA8 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC18.98■□□□□ 0.63
PCDH11YQ9BZA8 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDH11YQ9BZA8 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms