Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RTFDC1Q9BY42 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC17.82■□□□□ 0.44
RTFDC1Q9BY42 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC17.82■□□□□ 0.44
RTFDC1Q9BY42 RN7SL470P-201ENST00000583069 259 ntBASIC17.82■□□□□ 0.44
RTFDC1Q9BY42 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC17.82■□□□□ 0.44
RTFDC1Q9BY42 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC17.82■□□□□ 0.44
RTFDC1Q9BY42 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RTFDC1Q9BY42 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTFDC1Q9BY42 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RTFDC1Q9BY42 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTFDC1Q9BY42 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC17.82■□□□□ 0.44
RTFDC1Q9BY42 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.82■□□□□ 0.44
RTFDC1Q9BY42 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RTFDC1Q9BY42 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTFDC1Q9BY42 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.82■□□□□ 0.44
RTFDC1Q9BY42 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTFDC1Q9BY42 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
RTFDC1Q9BY42 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC17.82■□□□□ 0.44
RTFDC1Q9BY42 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 KRT17P5-201ENST00000332088 839 ntBASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 MIR1227-201ENST00000408484 88 ntBASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 MIR3180-2-201ENST00000581748 88 ntBASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RTFDC1Q9BY42 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 NEU3-207ENST00000534628 746 ntTSL 2 BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 AC124068.2-201ENST00000569473 1109 ntBASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 ACE3P-201ENST00000423435 1973 ntBASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms