Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
EBF4Q9BQW3 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.58□□□□□ -0.08
EBF4Q9BQW3 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
EBF4Q9BQW3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
EBF4Q9BQW3 TEX28P1-201ENST00000613479 1221 ntBASIC14.58□□□□□ -0.08
EBF4Q9BQW3 TEX28P2-201ENST00000617764 1221 ntBASIC14.58□□□□□ -0.08
EBF4Q9BQW3 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
EBF4Q9BQW3 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
EBF4Q9BQW3 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.58□□□□□ -0.08
EBF4Q9BQW3 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
EBF4Q9BQW3 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
EBF4Q9BQW3 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
EBF4Q9BQW3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
EBF4Q9BQW3 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.58□□□□□ -0.08
EBF4Q9BQW3 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
EBF4Q9BQW3 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.58□□□□□ -0.08
EBF4Q9BQW3 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
EBF4Q9BQW3 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
EBF4Q9BQW3 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
EBF4Q9BQW3 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.58□□□□□ -0.08
EBF4Q9BQW3 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
EBF4Q9BQW3 AC011498.7-201ENST00000624986 2027 ntBASIC14.58□□□□□ -0.08
EBF4Q9BQW3 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
EBF4Q9BQW3 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
EBF4Q9BQW3 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
EBF4Q9BQW3 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
EBF4Q9BQW3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
EBF4Q9BQW3 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
EBF4Q9BQW3 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
EBF4Q9BQW3 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
EBF4Q9BQW3 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
EBF4Q9BQW3 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
EBF4Q9BQW3 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.57□□□□□ -0.08
EBF4Q9BQW3 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
EBF4Q9BQW3 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.57□□□□□ -0.08
EBF4Q9BQW3 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
EBF4Q9BQW3 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
EBF4Q9BQW3 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
EBF4Q9BQW3 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
EBF4Q9BQW3 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.57□□□□□ -0.08
EBF4Q9BQW3 RN7SL618P-201ENST00000477850 296 ntBASIC14.57□□□□□ -0.08
EBF4Q9BQW3 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.57□□□□□ -0.08
EBF4Q9BQW3 AC005829.1-201ENST00000570002 483 ntBASIC14.57□□□□□ -0.08
EBF4Q9BQW3 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.57□□□□□ -0.08
EBF4Q9BQW3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.57□□□□□ -0.08
EBF4Q9BQW3 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.57□□□□□ -0.08
EBF4Q9BQW3 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
EBF4Q9BQW3 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
EBF4Q9BQW3 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
EBF4Q9BQW3 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
EBF4Q9BQW3 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
EBF4Q9BQW3 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
EBF4Q9BQW3 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.57□□□□□ -0.08
EBF4Q9BQW3 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
EBF4Q9BQW3 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
EBF4Q9BQW3 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
EBF4Q9BQW3 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
EBF4Q9BQW3 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
EBF4Q9BQW3 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.57□□□□□ -0.08
EBF4Q9BQW3 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.57□□□□□ -0.08
EBF4Q9BQW3 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
EBF4Q9BQW3 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
EBF4Q9BQW3 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 C8orf49-201ENST00000525043 1968 ntBASIC14.56□□□□□ -0.08
EBF4Q9BQW3 AGAP10P-201ENST00000454844 2418 ntBASIC14.56□□□□□ -0.08
EBF4Q9BQW3 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 HSPA8P5-201ENST00000456928 2069 ntBASIC14.56□□□□□ -0.08
EBF4Q9BQW3 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 Z82170.1-201ENST00000625081 3192 ntBASIC14.56□□□□□ -0.08
EBF4Q9BQW3 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 SPDYE7P-202ENST00000420373 878 ntBASIC14.56□□□□□ -0.08
EBF4Q9BQW3 AL353779.1-201ENST00000434793 351 ntBASIC14.56□□□□□ -0.08
EBF4Q9BQW3 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.56□□□□□ -0.08
EBF4Q9BQW3 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 MIR4469-201ENST00000583919 79 ntBASIC14.56□□□□□ -0.08
EBF4Q9BQW3 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 SPDYE12P-201ENST00000618416 771 ntBASIC14.56□□□□□ -0.08
EBF4Q9BQW3 AP001059.3-201ENST00000619053 235 ntBASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms