Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 AC131902.2-201ENST00000566892 2172 ntBASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 REXO1L6P-202ENST00000619970 1078 ntBASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 AC073389.1-201ENST00000595595 795 ntBASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 IFNL4P1-201ENST00000607083 540 ntBASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 AC090643.2-201ENST00000623442 2029 ntBASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB3IPQ96QF0 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms