Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IFT43Q96FT9 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
IFT43Q96FT9 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IFT43Q96FT9 AL645937.2-201ENST00000396808 931 ntBASIC15.47■□□□□ 0.07
IFT43Q96FT9 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
IFT43Q96FT9 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.47■□□□□ 0.07
IFT43Q96FT9 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
IFT43Q96FT9 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.47■□□□□ 0.07
IFT43Q96FT9 TDH-203ENST00000531764 1110 ntBASIC15.47■□□□□ 0.07
IFT43Q96FT9 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.47■□□□□ 0.07
IFT43Q96FT9 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
IFT43Q96FT9 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
IFT43Q96FT9 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.47■□□□□ 0.07
IFT43Q96FT9 NIFKP4-201ENST00000567275 1192 ntBASIC15.47■□□□□ 0.07
IFT43Q96FT9 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
IFT43Q96FT9 MIR6775-201ENST00000617557 69 ntBASIC15.47■□□□□ 0.07
IFT43Q96FT9 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.47■□□□□ 0.07
IFT43Q96FT9 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IFT43Q96FT9 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.47■□□□□ 0.07
IFT43Q96FT9 AC006504.5-208ENST00000588784 2401 ntBASIC15.47■□□□□ 0.07
IFT43Q96FT9 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
IFT43Q96FT9 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.47■□□□□ 0.07
IFT43Q96FT9 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
IFT43Q96FT9 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.47■□□□□ 0.07
IFT43Q96FT9 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IFT43Q96FT9 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
IFT43Q96FT9 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
IFT43Q96FT9 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
IFT43Q96FT9 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
IFT43Q96FT9 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IFT43Q96FT9 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IFT43Q96FT9 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IFT43Q96FT9 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IFT43Q96FT9 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IFT43Q96FT9 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
IFT43Q96FT9 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
IFT43Q96FT9 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
IFT43Q96FT9 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
IFT43Q96FT9 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
IFT43Q96FT9 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
IFT43Q96FT9 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
IFT43Q96FT9 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
IFT43Q96FT9 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
IFT43Q96FT9 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
IFT43Q96FT9 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.46■□□□□ 0.07
IFT43Q96FT9 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
IFT43Q96FT9 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
IFT43Q96FT9 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.46■□□□□ 0.07
IFT43Q96FT9 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
IFT43Q96FT9 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.46■□□□□ 0.07
IFT43Q96FT9 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
IFT43Q96FT9 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
IFT43Q96FT9 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.46■□□□□ 0.07
IFT43Q96FT9 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
IFT43Q96FT9 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
IFT43Q96FT9 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.46■□□□□ 0.07
IFT43Q96FT9 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.46■□□□□ 0.07
IFT43Q96FT9 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.46■□□□□ 0.07
IFT43Q96FT9 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.46■□□□□ 0.07
IFT43Q96FT9 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.46■□□□□ 0.07
IFT43Q96FT9 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
IFT43Q96FT9 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
IFT43Q96FT9 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.46■□□□□ 0.07
IFT43Q96FT9 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
IFT43Q96FT9 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.46■□□□□ 0.07
IFT43Q96FT9 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
IFT43Q96FT9 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
IFT43Q96FT9 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
IFT43Q96FT9 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.46■□□□□ 0.07
IFT43Q96FT9 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.46■□□□□ 0.07
IFT43Q96FT9 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC15.46■□□□□ 0.07
IFT43Q96FT9 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
IFT43Q96FT9 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.46■□□□□ 0.07
IFT43Q96FT9 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
IFT43Q96FT9 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
IFT43Q96FT9 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
IFT43Q96FT9 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
IFT43Q96FT9 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
IFT43Q96FT9 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
IFT43Q96FT9 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
IFT43Q96FT9 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
IFT43Q96FT9 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
IFT43Q96FT9 AL360270.3-201ENST00000609118 1348 ntBASIC15.45■□□□□ 0.06
IFT43Q96FT9 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
IFT43Q96FT9 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
IFT43Q96FT9 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
IFT43Q96FT9 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
IFT43Q96FT9 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
IFT43Q96FT9 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
IFT43Q96FT9 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
IFT43Q96FT9 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
IFT43Q96FT9 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
IFT43Q96FT9 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
IFT43Q96FT9 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
IFT43Q96FT9 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
IFT43Q96FT9 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.45■□□□□ 0.06
IFT43Q96FT9 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
IFT43Q96FT9 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
IFT43Q96FT9 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
IFT43Q96FT9 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms