Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF4Q92544 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF4Q92544 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF4Q92544 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF4Q92544 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.17□□□□□ -0.14
TM9SF4Q92544 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.17□□□□□ -0.14
TM9SF4Q92544 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
TM9SF4Q92544 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF4Q92544 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF4Q92544 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF4Q92544 AC148477.4-201ENST00000613430 1793 ntBASIC14.17□□□□□ -0.14
TM9SF4Q92544 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF4Q92544 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.16□□□□□ -0.14
TM9SF4Q92544 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF4Q92544 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.16□□□□□ -0.14
TM9SF4Q92544 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF4Q92544 AL354989.2-201ENST00000435838 1540 ntBASIC14.16□□□□□ -0.14
TM9SF4Q92544 LRRC59-203ENST00000576448 1531 ntBASIC14.16□□□□□ -0.14
TM9SF4Q92544 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF4Q92544 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.16□□□□□ -0.14
TM9SF4Q92544 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF4Q92544 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.16□□□□□ -0.14
TM9SF4Q92544 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.16□□□□□ -0.14
TM9SF4Q92544 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF4Q92544 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF4Q92544 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
TM9SF4Q92544 MTX1P1-201ENST00000440904 838 ntBASIC14.16□□□□□ -0.14
TM9SF4Q92544 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.16□□□□□ -0.14
TM9SF4Q92544 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.16□□□□□ -0.14
TM9SF4Q92544 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.16□□□□□ -0.14
TM9SF4Q92544 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF4Q92544 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.16□□□□□ -0.14
TM9SF4Q92544 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.16□□□□□ -0.14
TM9SF4Q92544 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.16□□□□□ -0.14
TM9SF4Q92544 EEF1DP1-201ENST00000585891 896 ntBASIC14.16□□□□□ -0.14
TM9SF4Q92544 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.16□□□□□ -0.14
TM9SF4Q92544 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.16□□□□□ -0.14
TM9SF4Q92544 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF4Q92544 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.16□□□□□ -0.14
TM9SF4Q92544 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
TM9SF4Q92544 AL139099.5-201ENST00000635274 300 ntBASIC14.16□□□□□ -0.14
TM9SF4Q92544 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.16□□□□□ -0.14
TM9SF4Q92544 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF4Q92544 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF4Q92544 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF4Q92544 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.16□□□□□ -0.14
TM9SF4Q92544 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF4Q92544 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
TM9SF4Q92544 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.16□□□□□ -0.14
TM9SF4Q92544 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF4Q92544 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF4Q92544 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
TM9SF4Q92544 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF4Q92544 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.16□□□□□ -0.14
TM9SF4Q92544 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
TM9SF4Q92544 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.16□□□□□ -0.14
TM9SF4Q92544 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TM9SF4Q92544 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF4Q92544 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF4Q92544 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.15□□□□□ -0.14
TM9SF4Q92544 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TM9SF4Q92544 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF4Q92544 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.15□□□□□ -0.14
TM9SF4Q92544 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.15□□□□□ -0.14
TM9SF4Q92544 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF4Q92544 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF4Q92544 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF4Q92544 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF4Q92544 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF4Q92544 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF4Q92544 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF4Q92544 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF4Q92544 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF4Q92544 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF4Q92544 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF4Q92544 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF4Q92544 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF4Q92544 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TM9SF4Q92544 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
TM9SF4Q92544 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF4Q92544 AL138709.1-201ENST00000614840 1693 ntBASIC14.15□□□□□ -0.14
TM9SF4Q92544 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF4Q92544 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TM9SF4Q92544 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF4Q92544 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF4Q92544 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF4Q92544 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF4Q92544 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF4Q92544 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF4Q92544 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
TM9SF4Q92544 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.15□□□□□ -0.14
TM9SF4Q92544 AL645937.2-201ENST00000396808 931 ntBASIC14.15□□□□□ -0.14
TM9SF4Q92544 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.15□□□□□ -0.14
TM9SF4Q92544 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.15□□□□□ -0.14
TM9SF4Q92544 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
TM9SF4Q92544 KLF2P2-201ENST00000416807 1039 ntBASIC14.15□□□□□ -0.14
TM9SF4Q92544 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.15□□□□□ -0.14
TM9SF4Q92544 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.15□□□□□ -0.14
TM9SF4Q92544 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.15□□□□□ -0.14
TM9SF4Q92544 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms