Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 SALL4P5-201ENST00000419001 1760 ntBASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 CICP24-201ENST00000605464 2705 ntBASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 AC092933.1-201ENST00000393644 945 ntBASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 MESTP3-201ENST00000503460 968 ntBASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 FTLP10-202ENST00000505798 471 ntBASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 AC106760.1-201ENST00000508690 800 ntBASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 AC012645.4-201ENST00000610691 1061 ntBASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 IGHV3-72-202ENST00000621503 303 ntBASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 AC007292.2-201ENST00000593524 1812 ntBASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRFBP1Q8NEF9 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 AC018529.2-202ENST00000611482 3087 ntBASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 CD8B2-202ENST00000417670 633 ntBASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 BCRP2-202ENST00000447763 634 ntBASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 BCRP6-201ENST00000510112 632 ntBASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 BCRP7-201ENST00000511549 544 ntBASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 RNA5SP486-201ENST00000515961 83 ntBASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms