Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SYNE3Q6ZMZ3 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SYNE3Q6ZMZ3 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.62■□□□□ 0.41
SYNE3Q6ZMZ3 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SYNE3Q6ZMZ3 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.62■□□□□ 0.41
SYNE3Q6ZMZ3 AC092933.1-201ENST00000393644 945 ntBASIC17.62■□□□□ 0.41
SYNE3Q6ZMZ3 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
SYNE3Q6ZMZ3 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
SYNE3Q6ZMZ3 AC005034.1-201ENST00000426657 489 ntBASIC17.62■□□□□ 0.41
SYNE3Q6ZMZ3 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SYNE3Q6ZMZ3 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SYNE3Q6ZMZ3 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.62■□□□□ 0.41
SYNE3Q6ZMZ3 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.62■□□□□ 0.41
SYNE3Q6ZMZ3 AC025279.2-201ENST00000569730 653 ntBASIC17.62■□□□□ 0.41
SYNE3Q6ZMZ3 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SYNE3Q6ZMZ3 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SYNE3Q6ZMZ3 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.62■□□□□ 0.41
SYNE3Q6ZMZ3 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.62■□□□□ 0.41
SYNE3Q6ZMZ3 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
SYNE3Q6ZMZ3 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SYNE3Q6ZMZ3 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SYNE3Q6ZMZ3 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SYNE3Q6ZMZ3 AC018529.2-202ENST00000611482 3087 ntBASIC17.62■□□□□ 0.41
SYNE3Q6ZMZ3 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SYNE3Q6ZMZ3 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SYNE3Q6ZMZ3 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SYNE3Q6ZMZ3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SYNE3Q6ZMZ3 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SYNE3Q6ZMZ3 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.62■□□□□ 0.41
SYNE3Q6ZMZ3 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SYNE3Q6ZMZ3 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 AC007969.1-201ENST00000433675 447 ntBASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 AC063926.2-201ENST00000623766 1308 ntBASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
SYNE3Q6ZMZ3 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SYNE3Q6ZMZ3 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SYNE3Q6ZMZ3 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SYNE3Q6ZMZ3 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SYNE3Q6ZMZ3 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC17.6■□□□□ 0.41
SYNE3Q6ZMZ3 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SYNE3Q6ZMZ3 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
SYNE3Q6ZMZ3 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
SYNE3Q6ZMZ3 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC17.6■□□□□ 0.41
SYNE3Q6ZMZ3 AC023908.3-201ENST00000564211 3047 ntBASIC17.6■□□□□ 0.41
SYNE3Q6ZMZ3 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SYNE3Q6ZMZ3 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SYNE3Q6ZMZ3 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SYNE3Q6ZMZ3 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SYNE3Q6ZMZ3 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.6■□□□□ 0.41
SYNE3Q6ZMZ3 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.6■□□□□ 0.41
SYNE3Q6ZMZ3 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.6■□□□□ 0.41
SYNE3Q6ZMZ3 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SYNE3Q6ZMZ3 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.6■□□□□ 0.41
SYNE3Q6ZMZ3 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.6■□□□□ 0.41
SYNE3Q6ZMZ3 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
SYNE3Q6ZMZ3 AC007551.1-201ENST00000457394 519 ntBASIC17.6■□□□□ 0.41
SYNE3Q6ZMZ3 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.6■□□□□ 0.41
SYNE3Q6ZMZ3 FTH1P14-201ENST00000482930 551 ntBASIC17.6■□□□□ 0.41
SYNE3Q6ZMZ3 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.6■□□□□ 0.41
SYNE3Q6ZMZ3 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.6■□□□□ 0.41
SYNE3Q6ZMZ3 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms