Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 AC073869.2-201ENST00000417338 1026 ntBASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 BCAS2P2-201ENST00000425064 674 ntBASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 RN7SL277P-201ENST00000481521 288 ntBASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 RPS23-204ENST00000507980 836 ntTSL 2 BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 LINC00431-202ENST00000636375 159 ntBASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 AL118508.1-201ENST00000613502 2345 ntBASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 DPY19L2P5-201ENST00000456300 331 ntBASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 AC010234.1-201ENST00000494599 870 ntBASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 AREG-202ENST00000502307 956 ntTSL 5 BASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 AC084752.1-201ENST00000509766 622 ntBASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 NSD1-211ENST00000511258 809 ntTSL 3 BASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 RNA5SP417-201ENST00000516459 108 ntBASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 HERC2P11-201ENST00000562845 725 ntBASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 AC100756.2-201ENST00000569537 736 ntBASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 AC139712.1-201ENST00000378256 1875 ntBASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CNKSR3Q6P9H4 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CNKSR3Q6P9H4 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.77■□□□□ 0.12
CNKSR3Q6P9H4 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CNKSR3Q6P9H4 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CNKSR3Q6P9H4 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CNKSR3Q6P9H4 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.77■□□□□ 0.12
CNKSR3Q6P9H4 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CNKSR3Q6P9H4 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.77■□□□□ 0.12
CNKSR3Q6P9H4 SSR4P1-203ENST00000599569 2260 ntBASIC15.77■□□□□ 0.12
CNKSR3Q6P9H4 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CNKSR3Q6P9H4 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CNKSR3Q6P9H4 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CNKSR3Q6P9H4 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC15.77■□□□□ 0.12
CNKSR3Q6P9H4 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CNKSR3Q6P9H4 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms