Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC8.86□□□□□ -0.99
HSPG2P98160 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC8.86□□□□□ -0.99
HSPG2P98160 RN7SL524P-201ENST00000581152 300 ntBASIC8.86□□□□□ -0.99
HSPG2P98160 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC8.86□□□□□ -0.99
HSPG2P98160 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
HSPG2P98160 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
HSPG2P98160 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
HSPG2P98160 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC8.86□□□□□ -0.99
HSPG2P98160 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
HSPG2P98160 AC092850.2-201ENST00000623821 2697 ntBASIC8.86□□□□□ -0.99
HSPG2P98160 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
HSPG2P98160 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
HSPG2P98160 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC8.86□□□□□ -0.99
HSPG2P98160 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
HSPG2P98160 RPSAP12-201ENST00000435879 888 ntBASIC8.86□□□□□ -0.99
HSPG2P98160 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
HSPG2P98160 UGT1A12P-201ENST00000447084 853 ntBASIC8.86□□□□□ -0.99
HSPG2P98160 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
HSPG2P98160 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC8.86□□□□□ -0.99
HSPG2P98160 AC134878.2-201ENST00000620700 1265 ntBASIC8.86□□□□□ -0.99
HSPG2P98160 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
HSPG2P98160 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
HSPG2P98160 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
HSPG2P98160 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC8.86□□□□□ -0.99
HSPG2P98160 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC8.86□□□□□ -0.99
HSPG2P98160 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
HSPG2P98160 AC106785.2-201ENST00000564385 1319 ntBASIC8.86□□□□□ -0.99
HSPG2P98160 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
HSPG2P98160 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC8.86□□□□□ -0.99
HSPG2P98160 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
HSPG2P98160 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
HSPG2P98160 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
HSPG2P98160 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
HSPG2P98160 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
HSPG2P98160 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
HSPG2P98160 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC8.86□□□□□ -0.99
HSPG2P98160 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
HSPG2P98160 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC8.86□□□□□ -0.99
HSPG2P98160 AP000244.1-201ENST00000424582 201 ntBASIC8.86□□□□□ -0.99
HSPG2P98160 SAP18P2-201ENST00000434334 459 ntBASIC8.86□□□□□ -0.99
HSPG2P98160 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC8.86□□□□□ -0.99
HSPG2P98160 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC8.86□□□□□ -0.99
HSPG2P98160 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC8.86□□□□□ -0.99
HSPG2P98160 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
HSPG2P98160 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
HSPG2P98160 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC8.86□□□□□ -0.99
HSPG2P98160 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
HSPG2P98160 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
HSPG2P98160 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
HSPG2P98160 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
HSPG2P98160 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
HSPG2P98160 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC8.85□□□□□ -0.99
HSPG2P98160 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
HSPG2P98160 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
HSPG2P98160 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
HSPG2P98160 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC8.85□□□□□ -0.99
HSPG2P98160 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC8.85□□□□□ -0.99
HSPG2P98160 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC8.85□□□□□ -0.99
HSPG2P98160 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC8.85□□□□□ -0.99
HSPG2P98160 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
HSPG2P98160 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC8.85□□□□□ -0.99
HSPG2P98160 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
HSPG2P98160 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC8.85□□□□□ -0.99
HSPG2P98160 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
HSPG2P98160 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
HSPG2P98160 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
HSPG2P98160 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
HSPG2P98160 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
HSPG2P98160 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
HSPG2P98160 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC8.85□□□□□ -0.99
HSPG2P98160 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
HSPG2P98160 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC8.85□□□□□ -0.99
HSPG2P98160 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
HSPG2P98160 AC092903.1-201ENST00000466506 262 ntBASIC8.85□□□□□ -0.99
HSPG2P98160 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
HSPG2P98160 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
HSPG2P98160 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC8.85□□□□□ -0.99
HSPG2P98160 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC8.85□□□□□ -0.99
HSPG2P98160 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC8.85□□□□□ -0.99
HSPG2P98160 WT1-209ENST00000530998 2421 ntTSL 2 BASIC8.85□□□□□ -0.99
HSPG2P98160 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
HSPG2P98160 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
HSPG2P98160 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
HSPG2P98160 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC8.85□□□□□ -0.99
HSPG2P98160 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC8.85□□□□□ -0.99
HSPG2P98160 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
HSPG2P98160 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC8.85□□□□□ -0.99
HSPG2P98160 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
HSPG2P98160 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
HSPG2P98160 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
HSPG2P98160 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC8.85□□□□□ -0.99
HSPG2P98160 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
HSPG2P98160 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC8.85□□□□□ -0.99
HSPG2P98160 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
HSPG2P98160 RPL18AP16-201ENST00000424057 531 ntBASIC8.85□□□□□ -0.99
HSPG2P98160 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC8.85□□□□□ -0.99
HSPG2P98160 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC8.85□□□□□ -0.99
HSPG2P98160 AC233724.9-201ENST00000511694 407 ntBASIC8.85□□□□□ -0.99
HSPG2P98160 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
HSPG2P98160 AL136298.3-201ENST00000556746 445 ntBASIC8.85□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms