Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SKP1P63208 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SKP1P63208 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SKP1P63208 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SKP1P63208 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SKP1P63208 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
SKP1P63208 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
SKP1P63208 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC14.21□□□□□ -0.14
SKP1P63208 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
SKP1P63208 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.21□□□□□ -0.14
SKP1P63208 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
SKP1P63208 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
SKP1P63208 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
SKP1P63208 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SKP1P63208 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SKP1P63208 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SKP1P63208 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SKP1P63208 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SKP1P63208 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SKP1P63208 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SKP1P63208 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SKP1P63208 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SKP1P63208 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.2□□□□□ -0.14
SKP1P63208 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.2□□□□□ -0.14
SKP1P63208 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SKP1P63208 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.2□□□□□ -0.14
SKP1P63208 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SKP1P63208 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.2□□□□□ -0.14
SKP1P63208 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SKP1P63208 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SKP1P63208 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.2□□□□□ -0.14
SKP1P63208 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SKP1P63208 MIR1202-201ENST00000408529 83 ntBASIC14.2□□□□□ -0.14
SKP1P63208 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SKP1P63208 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.2□□□□□ -0.14
SKP1P63208 AL355994.2-201ENST00000447882 704 ntBASIC14.2□□□□□ -0.14
SKP1P63208 HOMER2P2-201ENST00000451621 847 ntBASIC14.2□□□□□ -0.14
SKP1P63208 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SKP1P63208 COX5BP1-201ENST00000507622 393 ntBASIC14.2□□□□□ -0.14
SKP1P63208 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SKP1P63208 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.2□□□□□ -0.14
SKP1P63208 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.2□□□□□ -0.14
SKP1P63208 RN7SL713P-201ENST00000582127 302 ntBASIC14.2□□□□□ -0.14
SKP1P63208 OR10B1P-201ENST00000601666 907 ntBASIC14.2□□□□□ -0.14
SKP1P63208 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.2□□□□□ -0.14
SKP1P63208 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SKP1P63208 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.2□□□□□ -0.14
SKP1P63208 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SKP1P63208 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SKP1P63208 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SKP1P63208 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SKP1P63208 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SKP1P63208 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SKP1P63208 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SKP1P63208 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.2□□□□□ -0.14
SKP1P63208 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SKP1P63208 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
SKP1P63208 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SKP1P63208 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SKP1P63208 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SKP1P63208 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SKP1P63208 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SKP1P63208 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SKP1P63208 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SKP1P63208 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.19□□□□□ -0.14
SKP1P63208 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SKP1P63208 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SKP1P63208 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SKP1P63208 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SKP1P63208 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SKP1P63208 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.19□□□□□ -0.14
SKP1P63208 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SKP1P63208 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SKP1P63208 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SKP1P63208 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SKP1P63208 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.19□□□□□ -0.14
SKP1P63208 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.19□□□□□ -0.14
SKP1P63208 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SKP1P63208 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SKP1P63208 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.19□□□□□ -0.14
SKP1P63208 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.19□□□□□ -0.14
SKP1P63208 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SKP1P63208 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.19□□□□□ -0.14
SKP1P63208 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
SKP1P63208 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.19□□□□□ -0.14
SKP1P63208 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SKP1P63208 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.19□□□□□ -0.14
SKP1P63208 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SKP1P63208 AL136309.1-201ENST00000403917 691 ntBASIC14.19□□□□□ -0.14
SKP1P63208 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.19□□□□□ -0.14
SKP1P63208 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SKP1P63208 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.19□□□□□ -0.14
SKP1P63208 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
SKP1P63208 AC106820.3-201ENST00000561653 397 ntBASIC14.19□□□□□ -0.14
SKP1P63208 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.19□□□□□ -0.14
SKP1P63208 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
SKP1P63208 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.19□□□□□ -0.14
SKP1P63208 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.19□□□□□ -0.14
SKP1P63208 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SKP1P63208 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms