Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC022494.1-201ENST00000466044 728 ntBASIC13.32□□□□□ -0.28
GFRA1P56159 SERPINA13P-202ENST00000478994 924 ntBASIC13.32□□□□□ -0.28
GFRA1P56159 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.32□□□□□ -0.28
GFRA1P56159 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.32□□□□□ -0.28
GFRA1P56159 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GFRA1P56159 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GFRA1P56159 MIR3615-201ENST00000581999 87 ntBASIC13.32□□□□□ -0.28
GFRA1P56159 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GFRA1P56159 AC005324.6-201ENST00000587972 613 ntBASIC13.32□□□□□ -0.28
GFRA1P56159 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.32□□□□□ -0.28
GFRA1P56159 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
GFRA1P56159 KC6-205ENST00000599934 556 ntTSL 4 BASIC13.32□□□□□ -0.28
GFRA1P56159 BNIP3P13-201ENST00000599968 566 ntBASIC13.32□□□□□ -0.28
GFRA1P56159 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.32□□□□□ -0.28
GFRA1P56159 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.32□□□□□ -0.28
GFRA1P56159 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
GFRA1P56159 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.32□□□□□ -0.28
GFRA1P56159 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
GFRA1P56159 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GFRA1P56159 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GFRA1P56159 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
GFRA1P56159 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GFRA1P56159 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GFRA1P56159 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GFRA1P56159 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GFRA1P56159 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.32□□□□□ -0.28
GFRA1P56159 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.32□□□□□ -0.28
GFRA1P56159 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GFRA1P56159 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GFRA1P56159 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.32□□□□□ -0.28
GFRA1P56159 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GFRA1P56159 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GFRA1P56159 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.31□□□□□ -0.28
GFRA1P56159 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GFRA1P56159 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
GFRA1P56159 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GFRA1P56159 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GFRA1P56159 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
GFRA1P56159 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
GFRA1P56159 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GFRA1P56159 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.31□□□□□ -0.28
GFRA1P56159 AC244394.1-201ENST00000435000 1665 ntBASIC13.31□□□□□ -0.28
GFRA1P56159 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GFRA1P56159 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.31□□□□□ -0.28
GFRA1P56159 FGD5P1-202ENST00000614866 2498 ntBASIC13.31□□□□□ -0.28
GFRA1P56159 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GFRA1P56159 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GFRA1P56159 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GFRA1P56159 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GFRA1P56159 AGER-203ENST00000375065 665 ntTSL 2 BASIC13.31□□□□□ -0.28
GFRA1P56159 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GFRA1P56159 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC13.31□□□□□ -0.28
GFRA1P56159 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.31□□□□□ -0.28
GFRA1P56159 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GFRA1P56159 NOP2-211ENST00000540228 668 ntTSL 2 BASIC13.31□□□□□ -0.28
GFRA1P56159 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GFRA1P56159 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
GFRA1P56159 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
GFRA1P56159 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.31□□□□□ -0.28
GFRA1P56159 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.31□□□□□ -0.28
GFRA1P56159 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
GFRA1P56159 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GFRA1P56159 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GFRA1P56159 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GFRA1P56159 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GFRA1P56159 AL590440.2-201ENST00000641973 1595 ntBASIC13.31□□□□□ -0.28
GFRA1P56159 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GFRA1P56159 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
GFRA1P56159 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
GFRA1P56159 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.31□□□□□ -0.28
GFRA1P56159 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.31□□□□□ -0.28
GFRA1P56159 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
GFRA1P56159 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GFRA1P56159 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GFRA1P56159 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GFRA1P56159 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.31□□□□□ -0.28
GFRA1P56159 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GFRA1P56159 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
GFRA1P56159 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
GFRA1P56159 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GFRA1P56159 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GFRA1P56159 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
GFRA1P56159 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
GFRA1P56159 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
GFRA1P56159 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GFRA1P56159 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.3□□□□□ -0.28
GFRA1P56159 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GFRA1P56159 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.3□□□□□ -0.28
GFRA1P56159 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GFRA1P56159 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GFRA1P56159 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GFRA1P56159 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
GFRA1P56159 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GFRA1P56159 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
GFRA1P56159 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GFRA1P56159 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.3□□□□□ -0.28
GFRA1P56159 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
GFRA1P56159 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GFRA1P56159 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GFRA1P56159 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms