Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
VCPP55072 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.04■□□□□ 0.16
VCPP55072 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.04■□□□□ 0.16
VCPP55072 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.04■□□□□ 0.16
VCPP55072 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VCPP55072 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.04■□□□□ 0.16
VCPP55072 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VCPP55072 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VCPP55072 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
VCPP55072 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.04■□□□□ 0.16
VCPP55072 LINC00552-201ENST00000625151 2579 ntBASIC16.04■□□□□ 0.16
VCPP55072 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VCPP55072 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VCPP55072 AC232323.1-201ENST00000540724 2099 ntBASIC16.04■□□□□ 0.16
VCPP55072 REXO1L5P-201ENST00000622260 2098 ntBASIC16.04■□□□□ 0.16
VCPP55072 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
VCPP55072 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
VCPP55072 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VCPP55072 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VCPP55072 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VCPP55072 AC015818.8-201ENST00000587907 1519 ntBASIC16.04■□□□□ 0.16
VCPP55072 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.04■□□□□ 0.16
VCPP55072 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VCPP55072 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
VCPP55072 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VCPP55072 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VCPP55072 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VCPP55072 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VCPP55072 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.03■□□□□ 0.16
VCPP55072 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VCPP55072 AC023908.3-201ENST00000564211 3047 ntBASIC16.03■□□□□ 0.16
VCPP55072 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VCPP55072 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VCPP55072 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VCPP55072 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
VCPP55072 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VCPP55072 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
VCPP55072 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.03■□□□□ 0.16
VCPP55072 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VCPP55072 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VCPP55072 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
VCPP55072 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VCPP55072 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VCPP55072 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.03■□□□□ 0.16
VCPP55072 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.03■□□□□ 0.16
VCPP55072 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.03■□□□□ 0.16
VCPP55072 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC16.03■□□□□ 0.16
VCPP55072 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.03■□□□□ 0.16
VCPP55072 AC022137.2-201ENST00000503482 481 ntBASIC16.03■□□□□ 0.16
VCPP55072 AC026410.3-201ENST00000514280 936 ntBASIC16.03■□□□□ 0.16
VCPP55072 AP001582.1-201ENST00000525856 295 ntBASIC16.03■□□□□ 0.16
VCPP55072 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VCPP55072 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
VCPP55072 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.03■□□□□ 0.16
VCPP55072 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VCPP55072 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
VCPP55072 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.03■□□□□ 0.16
VCPP55072 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.03■□□□□ 0.16
VCPP55072 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VCPP55072 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
VCPP55072 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VCPP55072 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.03■□□□□ 0.16
VCPP55072 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.03■□□□□ 0.16
VCPP55072 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
VCPP55072 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VCPP55072 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VCPP55072 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.02■□□□□ 0.16
VCPP55072 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
VCPP55072 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VCPP55072 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
VCPP55072 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
VCPP55072 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VCPP55072 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.02■□□□□ 0.16
VCPP55072 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VCPP55072 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VCPP55072 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
VCPP55072 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.02■□□□□ 0.16
VCPP55072 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
VCPP55072 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
VCPP55072 MAGEA5-201ENST00000446757 942 ntBASIC16.02■□□□□ 0.16
VCPP55072 AL133466.1-201ENST00000447582 150 ntBASIC16.02■□□□□ 0.16
VCPP55072 APOA2-204ENST00000464492 530 ntTSL 3 BASIC16.02■□□□□ 0.16
VCPP55072 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.02■□□□□ 0.16
VCPP55072 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.02■□□□□ 0.16
VCPP55072 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.02■□□□□ 0.16
VCPP55072 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.02■□□□□ 0.16
VCPP55072 FGFR3P5-201ENST00000564496 886 ntBASIC16.02■□□□□ 0.16
VCPP55072 AP000845.1-201ENST00000581677 2131 ntBASIC16.02■□□□□ 0.16
VCPP55072 NKG7-204ENST00000595217 816 ntTSL 2 BASIC16.02■□□□□ 0.16
VCPP55072 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.02■□□□□ 0.16
VCPP55072 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.02■□□□□ 0.16
VCPP55072 AP001505.2-201ENST00000616815 443 ntBASIC16.02■□□□□ 0.16
VCPP55072 HLA-C-210ENST00000640219 976 ntBASIC16.02■□□□□ 0.16
VCPP55072 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
VCPP55072 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
VCPP55072 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
VCPP55072 REXO1L2P-201ENST00000425429 2069 ntBASIC16.02■□□□□ 0.15
VCPP55072 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
VCPP55072 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
VCPP55072 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms