Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LHX1P48742 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.73■□□□□ 0.11
LHX1P48742 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15.73■□□□□ 0.11
LHX1P48742 AC099548.2-209ENST00000480264 625 ntBASIC15.73■□□□□ 0.11
LHX1P48742 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.73■□□□□ 0.11
LHX1P48742 ZNF767P-206ENST00000513792 565 ntBASIC15.73■□□□□ 0.11
LHX1P48742 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.73■□□□□ 0.11
LHX1P48742 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.73■□□□□ 0.11
LHX1P48742 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.73■□□□□ 0.11
LHX1P48742 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.73■□□□□ 0.11
LHX1P48742 MIR3615-201ENST00000581999 87 ntBASIC15.73■□□□□ 0.11
LHX1P48742 AC103810.3-201ENST00000583567 96 ntBASIC15.73■□□□□ 0.11
LHX1P48742 AC009884.2-201ENST00000603110 324 ntBASIC15.73■□□□□ 0.11
LHX1P48742 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.73■□□□□ 0.11
LHX1P48742 AC022748.3-201ENST00000621828 275 ntBASIC15.73■□□□□ 0.11
LHX1P48742 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
LHX1P48742 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LHX1P48742 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LHX1P48742 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.73■□□□□ 0.11
LHX1P48742 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.73■□□□□ 0.11
LHX1P48742 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LHX1P48742 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LHX1P48742 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LHX1P48742 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LHX1P48742 AC244394.1-201ENST00000435000 1665 ntBASIC15.73■□□□□ 0.11
LHX1P48742 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
LHX1P48742 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.73■□□□□ 0.11
LHX1P48742 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
LHX1P48742 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LHX1P48742 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LHX1P48742 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
LHX1P48742 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.72■□□□□ 0.11
LHX1P48742 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LHX1P48742 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LHX1P48742 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LHX1P48742 AC018529.2-202ENST00000611482 3087 ntBASIC15.72■□□□□ 0.11
LHX1P48742 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
LHX1P48742 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.72■□□□□ 0.11
LHX1P48742 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LHX1P48742 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
LHX1P48742 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
LHX1P48742 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.72■□□□□ 0.11
LHX1P48742 FGD5P1-202ENST00000614866 2498 ntBASIC15.72■□□□□ 0.11
LHX1P48742 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LHX1P48742 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
LHX1P48742 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LHX1P48742 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LHX1P48742 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LHX1P48742 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
LHX1P48742 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LHX1P48742 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LHX1P48742 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LHX1P48742 AC013726.1-201ENST00000563747 2285 ntBASIC15.72■□□□□ 0.11
LHX1P48742 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.72■□□□□ 0.11
LHX1P48742 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LHX1P48742 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LHX1P48742 RNMTL1P1-201ENST00000454103 560 ntBASIC15.72■□□□□ 0.11
LHX1P48742 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.72■□□□□ 0.11
LHX1P48742 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.72■□□□□ 0.11
LHX1P48742 RN7SL163P-201ENST00000583100 276 ntBASIC15.72■□□□□ 0.11
LHX1P48742 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.72■□□□□ 0.11
LHX1P48742 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
LHX1P48742 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.72■□□□□ 0.11
LHX1P48742 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.72■□□□□ 0.11
LHX1P48742 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LHX1P48742 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LHX1P48742 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
LHX1P48742 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LHX1P48742 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
LHX1P48742 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LHX1P48742 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.72■□□□□ 0.11
LHX1P48742 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.72■□□□□ 0.11
LHX1P48742 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LHX1P48742 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
LHX1P48742 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
LHX1P48742 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LHX1P48742 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.71■□□□□ 0.11
LHX1P48742 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LHX1P48742 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.71■□□□□ 0.11
LHX1P48742 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LHX1P48742 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LHX1P48742 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LHX1P48742 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LHX1P48742 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LHX1P48742 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.71■□□□□ 0.11
LHX1P48742 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.71■□□□□ 0.11
LHX1P48742 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.71■□□□□ 0.11
LHX1P48742 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LHX1P48742 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
LHX1P48742 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.71■□□□□ 0.11
LHX1P48742 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.71■□□□□ 0.11
LHX1P48742 AC005740.2-201ENST00000511085 419 ntBASIC15.71■□□□□ 0.11
LHX1P48742 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LHX1P48742 AC020914.3-201ENST00000594712 304 ntBASIC15.71■□□□□ 0.11
LHX1P48742 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LHX1P48742 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.71■□□□□ 0.11
LHX1P48742 MIR6720-201ENST00000611664 98 ntBASIC15.71■□□□□ 0.11
LHX1P48742 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.71■□□□□ 0.11
LHX1P48742 AC004923.1-202ENST00000642106 209 ntBASIC15.71■□□□□ 0.11
LHX1P48742 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms