Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
NR4A2P43354 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
NR4A2P43354 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
NR4A2P43354 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A2P43354 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A2P43354 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A2P43354 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A2P43354 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.69□□□□□ -0.22
NR4A2P43354 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A2P43354 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
NR4A2P43354 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A2P43354 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A2P43354 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A2P43354 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A2P43354 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.69□□□□□ -0.22
NR4A2P43354 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A2P43354 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A2P43354 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.69□□□□□ -0.22
NR4A2P43354 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.69□□□□□ -0.22
NR4A2P43354 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.69□□□□□ -0.22
NR4A2P43354 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
NR4A2P43354 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.69□□□□□ -0.22
NR4A2P43354 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.69□□□□□ -0.22
NR4A2P43354 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.69□□□□□ -0.22
NR4A2P43354 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
NR4A2P43354 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.69□□□□□ -0.22
NR4A2P43354 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A2P43354 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.69□□□□□ -0.22
NR4A2P43354 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.69□□□□□ -0.22
NR4A2P43354 AC009407.1-201ENST00000568958 598 ntBASIC13.69□□□□□ -0.22
NR4A2P43354 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
NR4A2P43354 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A2P43354 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.69□□□□□ -0.22
NR4A2P43354 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
NR4A2P43354 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A2P43354 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
NR4A2P43354 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.69□□□□□ -0.22
NR4A2P43354 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A2P43354 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A2P43354 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A2P43354 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A2P43354 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A2P43354 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.69□□□□□ -0.22
NR4A2P43354 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A2P43354 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A2P43354 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
NR4A2P43354 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A2P43354 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.69□□□□□ -0.22
NR4A2P43354 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
NR4A2P43354 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A2P43354 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A2P43354 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A2P43354 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.68□□□□□ -0.22
NR4A2P43354 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A2P43354 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
NR4A2P43354 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A2P43354 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A2P43354 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.68□□□□□ -0.22
NR4A2P43354 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A2P43354 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A2P43354 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
NR4A2P43354 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A2P43354 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A2P43354 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A2P43354 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A2P43354 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
NR4A2P43354 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A2P43354 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
NR4A2P43354 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A2P43354 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
NR4A2P43354 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A2P43354 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
NR4A2P43354 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A2P43354 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A2P43354 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.68□□□□□ -0.22
NR4A2P43354 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.68□□□□□ -0.22
NR4A2P43354 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
NR4A2P43354 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.68□□□□□ -0.22
NR4A2P43354 RN7SL692P-201ENST00000464677 288 ntBASIC13.68□□□□□ -0.22
NR4A2P43354 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A2P43354 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A2P43354 BANF1P1-201ENST00000553684 263 ntBASIC13.68□□□□□ -0.22
NR4A2P43354 AL079307.3-201ENST00000556114 283 ntBASIC13.68□□□□□ -0.22
NR4A2P43354 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.68□□□□□ -0.22
NR4A2P43354 AL596325.1-201ENST00000563991 1082 ntBASIC13.68□□□□□ -0.22
NR4A2P43354 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.68□□□□□ -0.22
NR4A2P43354 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.68□□□□□ -0.22
NR4A2P43354 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.68□□□□□ -0.22
NR4A2P43354 AL844908.2-201ENST00000609461 460 ntBASIC13.68□□□□□ -0.22
NR4A2P43354 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A2P43354 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A2P43354 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A2P43354 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.68□□□□□ -0.22
NR4A2P43354 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A2P43354 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A2P43354 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A2P43354 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A2P43354 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A2P43354 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.68□□□□□ -0.22
NR4A2P43354 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms