Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
NCAPD3P42695 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
NCAPD3P42695 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
NCAPD3P42695 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
NCAPD3P42695 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC25.32■■□□□ 1.64
NCAPD3P42695 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC25.32■■□□□ 1.64
NCAPD3P42695 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
NCAPD3P42695 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
NCAPD3P42695 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC25.32■■□□□ 1.64
NCAPD3P42695 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
NCAPD3P42695 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC25.32■■□□□ 1.64
NCAPD3P42695 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
NCAPD3P42695 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
NCAPD3P42695 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC25.32■■□□□ 1.64
NCAPD3P42695 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC25.32■■□□□ 1.64
NCAPD3P42695 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
NCAPD3P42695 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC25.31■■□□□ 1.64
NCAPD3P42695 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC25.31■■□□□ 1.64
NCAPD3P42695 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
NCAPD3P42695 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
NCAPD3P42695 HLA-DMA-202ENST00000395303 1007 ntBASIC25.31■■□□□ 1.64
NCAPD3P42695 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC25.31■■□□□ 1.64
NCAPD3P42695 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
NCAPD3P42695 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC25.31■■□□□ 1.64
NCAPD3P42695 IGKV1OR-2-201ENST00000457995 350 ntBASIC25.31■■□□□ 1.64
NCAPD3P42695 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
NCAPD3P42695 CMC2-204ENST00000562713 573 ntTSL 3 BASIC25.31■■□□□ 1.64
NCAPD3P42695 CMC2-209ENST00000565108 399 ntTSL 2 BASIC25.31■■□□□ 1.64
NCAPD3P42695 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC25.31■■□□□ 1.64
NCAPD3P42695 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC25.31■■□□□ 1.64
NCAPD3P42695 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC25.31■■□□□ 1.64
NCAPD3P42695 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
NCAPD3P42695 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
NCAPD3P42695 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
NCAPD3P42695 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC25.31■■□□□ 1.64
NCAPD3P42695 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
NCAPD3P42695 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
NCAPD3P42695 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
NCAPD3P42695 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC25.3■■□□□ 1.64
NCAPD3P42695 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
NCAPD3P42695 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
NCAPD3P42695 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC25.3■■□□□ 1.64
NCAPD3P42695 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC25.3■■□□□ 1.64
NCAPD3P42695 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC25.3■■□□□ 1.64
NCAPD3P42695 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
NCAPD3P42695 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
NCAPD3P42695 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC25.3■■□□□ 1.64
NCAPD3P42695 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
NCAPD3P42695 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
NCAPD3P42695 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
NCAPD3P42695 ABCD1P4-201ENST00000399687 604 ntBASIC25.3■■□□□ 1.64
NCAPD3P42695 AL121949.3-201ENST00000406684 385 ntBASIC25.3■■□□□ 1.64
NCAPD3P42695 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC25.3■■□□□ 1.64
NCAPD3P42695 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC25.3■■□□□ 1.64
NCAPD3P42695 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
NCAPD3P42695 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
NCAPD3P42695 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
NCAPD3P42695 AC113385.2-201ENST00000614465 762 ntBASIC25.3■■□□□ 1.64
NCAPD3P42695 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
NCAPD3P42695 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
NCAPD3P42695 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
NCAPD3P42695 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
NCAPD3P42695 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
NCAPD3P42695 CICP23-201ENST00000605013 2741 ntBASIC25.3■■□□□ 1.64
NCAPD3P42695 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
NCAPD3P42695 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC25.3■■□□□ 1.64
NCAPD3P42695 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC25.3■■□□□ 1.64
NCAPD3P42695 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
NCAPD3P42695 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
NCAPD3P42695 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
NCAPD3P42695 AC133141.1-201ENST00000443015 339 ntBASIC25.29■■□□□ 1.64
NCAPD3P42695 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC25.29■■□□□ 1.64
NCAPD3P42695 HNRNPA1P56-201ENST00000505767 954 ntBASIC25.29■■□□□ 1.64
NCAPD3P42695 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC25.29■■□□□ 1.64
NCAPD3P42695 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
NCAPD3P42695 AC104506.1-201ENST00000609247 429 ntBASIC25.29■■□□□ 1.64
NCAPD3P42695 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC25.29■■□□□ 1.64
NCAPD3P42695 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
NCAPD3P42695 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
NCAPD3P42695 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
NCAPD3P42695 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
NCAPD3P42695 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC25.29■■□□□ 1.64
NCAPD3P42695 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
NCAPD3P42695 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC25.29■■□□□ 1.64
NCAPD3P42695 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
NCAPD3P42695 PCDH8P1-201ENST00000428983 2773 ntBASIC25.29■■□□□ 1.64
NCAPD3P42695 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
NCAPD3P42695 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
NCAPD3P42695 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
NCAPD3P42695 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
NCAPD3P42695 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
NCAPD3P42695 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC25.28■■□□□ 1.64
NCAPD3P42695 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC25.28■■□□□ 1.64
NCAPD3P42695 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC25.28■■□□□ 1.64
NCAPD3P42695 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
NCAPD3P42695 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC25.28■■□□□ 1.64
NCAPD3P42695 AC005586.2-201ENST00000563946 837 ntBASIC25.28■■□□□ 1.64
NCAPD3P42695 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC25.28■■□□□ 1.64
NCAPD3P42695 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
NCAPD3P42695 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms