Protein–RNA interactions for Protein: P42338

PIK3CB, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3CBP42338 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PIK3CBP42338 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PIK3CBP42338 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PIK3CBP42338 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PIK3CBP42338 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
PIK3CBP42338 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PIK3CBP42338 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PIK3CBP42338 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PIK3CBP42338 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PIK3CBP42338 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PIK3CBP42338 AC003102.2-201ENST00000589195 1469 ntBASIC14.37□□□□□ -0.11
PIK3CBP42338 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PIK3CBP42338 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PIK3CBP42338 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PIK3CBP42338 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3CBP42338 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3CBP42338 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.36□□□□□ -0.11
PIK3CBP42338 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PIK3CBP42338 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3CBP42338 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3CBP42338 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3CBP42338 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
PIK3CBP42338 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3CBP42338 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.36□□□□□ -0.11
PIK3CBP42338 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3CBP42338 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.36□□□□□ -0.11
PIK3CBP42338 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.36□□□□□ -0.11
PIK3CBP42338 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3CBP42338 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
PIK3CBP42338 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3CBP42338 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3CBP42338 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3CBP42338 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.36□□□□□ -0.11
PIK3CBP42338 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.36□□□□□ -0.11
PIK3CBP42338 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3CBP42338 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3CBP42338 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
PIK3CBP42338 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.36□□□□□ -0.11
PIK3CBP42338 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.36□□□□□ -0.11
PIK3CBP42338 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.36□□□□□ -0.11
PIK3CBP42338 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.36□□□□□ -0.11
PIK3CBP42338 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
PIK3CBP42338 FO681548.1-201ENST00000455617 1132 ntBASIC14.36□□□□□ -0.11
PIK3CBP42338 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.36□□□□□ -0.11
PIK3CBP42338 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3CBP42338 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.36□□□□□ -0.11
PIK3CBP42338 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.36□□□□□ -0.11
PIK3CBP42338 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.36□□□□□ -0.11
PIK3CBP42338 AC015936.2-201ENST00000593177 259 ntBASIC14.36□□□□□ -0.11
PIK3CBP42338 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
PIK3CBP42338 AL358472.5-202ENST00000641448 1267 ntBASIC14.36□□□□□ -0.11
PIK3CBP42338 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3CBP42338 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3CBP42338 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
PIK3CBP42338 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3CBP42338 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3CBP42338 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3CBP42338 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
PIK3CBP42338 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3CBP42338 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.36□□□□□ -0.11
PIK3CBP42338 AL354702.1-201ENST00000442006 1960 ntBASIC14.36□□□□□ -0.11
PIK3CBP42338 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3CBP42338 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PIK3CBP42338 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3CBP42338 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.36□□□□□ -0.11
PIK3CBP42338 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3CBP42338 AC138969.2-201ENST00000532739 9932 ntBASIC14.36□□□□□ -0.11
PIK3CBP42338 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3CBP42338 AC117489.1-201ENST00000625169 3217 ntBASIC14.36□□□□□ -0.11
PIK3CBP42338 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PIK3CBP42338 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.35□□□□□ -0.11
PIK3CBP42338 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.35□□□□□ -0.11
PIK3CBP42338 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PIK3CBP42338 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PIK3CBP42338 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PIK3CBP42338 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PIK3CBP42338 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
PIK3CBP42338 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PIK3CBP42338 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PIK3CBP42338 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.35□□□□□ -0.11
PIK3CBP42338 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PIK3CBP42338 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PIK3CBP42338 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PIK3CBP42338 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.35□□□□□ -0.11
PIK3CBP42338 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PIK3CBP42338 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.35□□□□□ -0.11
PIK3CBP42338 AC005229.1-201ENST00000392885 409 ntBASIC14.35□□□□□ -0.11
PIK3CBP42338 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.35□□□□□ -0.11
PIK3CBP42338 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.35□□□□□ -0.11
PIK3CBP42338 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PIK3CBP42338 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PIK3CBP42338 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.35□□□□□ -0.11
PIK3CBP42338 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.35□□□□□ -0.11
PIK3CBP42338 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.35□□□□□ -0.11
PIK3CBP42338 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.35□□□□□ -0.11
PIK3CBP42338 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.35□□□□□ -0.11
PIK3CBP42338 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.35□□□□□ -0.11
PIK3CBP42338 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.35□□□□□ -0.11
PIK3CBP42338 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
PIK3CBP42338 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms