Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.29□□□□□ -0.12
KRT20P35900 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT20P35900 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.29□□□□□ -0.12
KRT20P35900 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT20P35900 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.29□□□□□ -0.12
KRT20P35900 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KRT20P35900 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
KRT20P35900 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
KRT20P35900 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KRT20P35900 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT20P35900 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT20P35900 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT20P35900 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.29□□□□□ -0.12
KRT20P35900 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
KRT20P35900 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
KRT20P35900 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KRT20P35900 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.29□□□□□ -0.12
KRT20P35900 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.29□□□□□ -0.12
KRT20P35900 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.29□□□□□ -0.12
KRT20P35900 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.29□□□□□ -0.12
KRT20P35900 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.29□□□□□ -0.12
KRT20P35900 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.29□□□□□ -0.12
KRT20P35900 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KRT20P35900 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.29□□□□□ -0.12
KRT20P35900 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.29□□□□□ -0.12
KRT20P35900 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
KRT20P35900 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KRT20P35900 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT20P35900 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT20P35900 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT20P35900 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT20P35900 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT20P35900 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT20P35900 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.29□□□□□ -0.12
KRT20P35900 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT20P35900 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT20P35900 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
KRT20P35900 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT20P35900 BEND3P1-201ENST00000421591 1944 ntBASIC14.29□□□□□ -0.12
KRT20P35900 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.29□□□□□ -0.12
KRT20P35900 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT20P35900 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT20P35900 MTHFR-210ENST00000641407 2387 ntBASIC14.29□□□□□ -0.12
KRT20P35900 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT20P35900 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT20P35900 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
KRT20P35900 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KRT20P35900 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT20P35900 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT20P35900 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
KRT20P35900 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT20P35900 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KRT20P35900 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT20P35900 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
KRT20P35900 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT20P35900 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT20P35900 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT20P35900 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT20P35900 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT20P35900 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT20P35900 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT20P35900 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.28□□□□□ -0.12
KRT20P35900 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KRT20P35900 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.28□□□□□ -0.12
KRT20P35900 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.28□□□□□ -0.12
KRT20P35900 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.28□□□□□ -0.12
KRT20P35900 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KRT20P35900 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT20P35900 AC004066.1-201ENST00000502488 802 ntBASIC14.28□□□□□ -0.12
KRT20P35900 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.28□□□□□ -0.12
KRT20P35900 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
KRT20P35900 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KRT20P35900 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT20P35900 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KRT20P35900 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
KRT20P35900 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.28□□□□□ -0.12
KRT20P35900 MIR3197-201ENST00000582241 73 ntBASIC14.28□□□□□ -0.12
KRT20P35900 AC138761.1-201ENST00000584393 385 ntBASIC14.28□□□□□ -0.12
KRT20P35900 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.28□□□□□ -0.12
KRT20P35900 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
KRT20P35900 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
KRT20P35900 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KRT20P35900 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT20P35900 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.28□□□□□ -0.12
KRT20P35900 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
KRT20P35900 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.28□□□□□ -0.12
KRT20P35900 AL645728.2-202ENST00000641679 227 ntBASIC14.28□□□□□ -0.12
KRT20P35900 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
KRT20P35900 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KRT20P35900 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT20P35900 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
KRT20P35900 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
KRT20P35900 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KRT20P35900 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KRT20P35900 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.28□□□□□ -0.12
KRT20P35900 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT20P35900 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
KRT20P35900 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.27□□□□□ -0.12
KRT20P35900 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
KRT20P35900 INTS4P2-202ENST00000614726 2019 ntBASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms