Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SHC1P29353 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.75□□□□□ -0.21
SHC1P29353 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SHC1P29353 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHC1P29353 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHC1P29353 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SHC1P29353 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.75□□□□□ -0.21
SHC1P29353 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
SHC1P29353 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHC1P29353 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHC1P29353 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHC1P29353 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SHC1P29353 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
SHC1P29353 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SHC1P29353 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHC1P29353 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.75□□□□□ -0.21
SHC1P29353 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.75□□□□□ -0.21
SHC1P29353 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
SHC1P29353 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.75□□□□□ -0.21
SHC1P29353 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.75□□□□□ -0.21
SHC1P29353 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.75□□□□□ -0.21
SHC1P29353 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.75□□□□□ -0.21
SHC1P29353 AC022137.2-201ENST00000503482 481 ntBASIC13.75□□□□□ -0.21
SHC1P29353 AC106760.1-201ENST00000508690 800 ntBASIC13.75□□□□□ -0.21
SHC1P29353 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SHC1P29353 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SHC1P29353 CR383656.12-201ENST00000549567 513 ntBASIC13.75□□□□□ -0.21
SHC1P29353 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.75□□□□□ -0.21
SHC1P29353 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.75□□□□□ -0.21
SHC1P29353 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHC1P29353 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.75□□□□□ -0.21
SHC1P29353 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
SHC1P29353 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.75□□□□□ -0.21
SHC1P29353 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.75□□□□□ -0.21
SHC1P29353 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.75□□□□□ -0.21
SHC1P29353 PRSS30P-206ENST00000641773 873 ntBASIC13.75□□□□□ -0.21
SHC1P29353 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SHC1P29353 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SHC1P29353 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SHC1P29353 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SHC1P29353 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHC1P29353 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SHC1P29353 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
SHC1P29353 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.75□□□□□ -0.21
SHC1P29353 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHC1P29353 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHC1P29353 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.75□□□□□ -0.21
SHC1P29353 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHC1P29353 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SHC1P29353 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHC1P29353 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SHC1P29353 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHC1P29353 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SHC1P29353 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
SHC1P29353 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHC1P29353 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHC1P29353 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.74□□□□□ -0.21
SHC1P29353 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHC1P29353 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHC1P29353 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHC1P29353 MTHFR-210ENST00000641407 2387 ntBASIC13.74□□□□□ -0.21
SHC1P29353 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SHC1P29353 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.74□□□□□ -0.21
SHC1P29353 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHC1P29353 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
SHC1P29353 AC134312.5-201ENST00000568031 1313 ntBASIC13.74□□□□□ -0.21
SHC1P29353 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHC1P29353 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHC1P29353 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHC1P29353 AL139094.1-201ENST00000405549 1188 ntBASIC13.74□□□□□ -0.21
SHC1P29353 BAATP1-201ENST00000412284 1225 ntBASIC13.74□□□□□ -0.21
SHC1P29353 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.74□□□□□ -0.21
SHC1P29353 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.74□□□□□ -0.21
SHC1P29353 AC012441.1-201ENST00000446669 685 ntBASIC13.74□□□□□ -0.21
SHC1P29353 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.74□□□□□ -0.21
SHC1P29353 AP001889.1-201ENST00000525414 633 ntBASIC13.74□□□□□ -0.21
SHC1P29353 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
SHC1P29353 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.74□□□□□ -0.21
SHC1P29353 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SHC1P29353 PTP4A1P2-201ENST00000546033 454 ntBASIC13.74□□□□□ -0.21
SHC1P29353 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.74□□□□□ -0.21
SHC1P29353 AC009486.1-201ENST00000569860 813 ntBASIC13.74□□□□□ -0.21
SHC1P29353 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.74□□□□□ -0.21
SHC1P29353 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.74□□□□□ -0.21
SHC1P29353 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SHC1P29353 AP005019.2-201ENST00000615104 511 ntBASIC13.74□□□□□ -0.21
SHC1P29353 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.74□□□□□ -0.21
SHC1P29353 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.74□□□□□ -0.21
SHC1P29353 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.74□□□□□ -0.21
SHC1P29353 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
SHC1P29353 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHC1P29353 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHC1P29353 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.74□□□□□ -0.21
SHC1P29353 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHC1P29353 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHC1P29353 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHC1P29353 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.74□□□□□ -0.21
SHC1P29353 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
SHC1P29353 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.74□□□□□ -0.21
SHC1P29353 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms