Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CD53P19397 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.65□□□□□ -0.22
CD53P19397 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD53P19397 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CD53P19397 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD53P19397 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CD53P19397 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD53P19397 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD53P19397 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD53P19397 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CD53P19397 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD53P19397 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CD53P19397 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD53P19397 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD53P19397 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD53P19397 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CD53P19397 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CD53P19397 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CD53P19397 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD53P19397 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CD53P19397 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.65□□□□□ -0.22
CD53P19397 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD53P19397 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD53P19397 AC104457.1-201ENST00000401024 814 ntBASIC13.65□□□□□ -0.22
CD53P19397 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.65□□□□□ -0.22
CD53P19397 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.65□□□□□ -0.22
CD53P19397 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CD53P19397 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CD53P19397 TPT1P11-201ENST00000458482 498 ntBASIC13.65□□□□□ -0.22
CD53P19397 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
CD53P19397 RN7SL399P-201ENST00000471648 279 ntBASIC13.65□□□□□ -0.22
CD53P19397 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CD53P19397 SLC25A47P1-201ENST00000531577 414 ntBASIC13.65□□□□□ -0.22
CD53P19397 AL583810.1-201ENST00000553344 1045 ntBASIC13.65□□□□□ -0.22
CD53P19397 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.65□□□□□ -0.22
CD53P19397 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.65□□□□□ -0.22
CD53P19397 RN7SL219P-201ENST00000582872 296 ntBASIC13.65□□□□□ -0.22
CD53P19397 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.65□□□□□ -0.22
CD53P19397 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.65□□□□□ -0.22
CD53P19397 MIR6787-201ENST00000616675 61 ntBASIC13.65□□□□□ -0.22
CD53P19397 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CD53P19397 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CD53P19397 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
CD53P19397 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD53P19397 AL928921.2-201ENST00000641325 2442 ntBASIC13.65□□□□□ -0.22
CD53P19397 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CD53P19397 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CD53P19397 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
CD53P19397 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD53P19397 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CD53P19397 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD53P19397 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CD53P19397 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CD53P19397 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD53P19397 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD53P19397 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
CD53P19397 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.65□□□□□ -0.23
CD53P19397 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.64□□□□□ -0.23
CD53P19397 PDIA3P1-201ENST00000471856 1510 ntBASIC13.64□□□□□ -0.23
CD53P19397 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.64□□□□□ -0.23
CD53P19397 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CD53P19397 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD53P19397 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CD53P19397 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CD53P19397 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD53P19397 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.64□□□□□ -0.23
CD53P19397 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.64□□□□□ -0.23
CD53P19397 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CD53P19397 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD53P19397 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD53P19397 INTS4P1-203ENST00000641008 3683 ntBASIC13.64□□□□□ -0.23
CD53P19397 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CD53P19397 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD53P19397 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.64□□□□□ -0.23
CD53P19397 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD53P19397 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD53P19397 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD53P19397 AZGP1P1-201ENST00000411909 902 ntBASIC13.64□□□□□ -0.23
CD53P19397 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD53P19397 KLF2P4-201ENST00000451959 1225 ntBASIC13.64□□□□□ -0.23
CD53P19397 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CD53P19397 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.64□□□□□ -0.23
CD53P19397 CTBP2P5-201ENST00000454986 1264 ntBASIC13.64□□□□□ -0.23
CD53P19397 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.64□□□□□ -0.23
CD53P19397 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.64□□□□□ -0.23
CD53P19397 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.64□□□□□ -0.23
CD53P19397 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.64□□□□□ -0.23
CD53P19397 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.64□□□□□ -0.23
CD53P19397 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CD53P19397 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.64□□□□□ -0.23
CD53P19397 MIR6869-201ENST00000619434 62 ntBASIC13.64□□□□□ -0.23
CD53P19397 GPR182-203ENST00000622922 591 ntBASIC13.64□□□□□ -0.23
CD53P19397 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD53P19397 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD53P19397 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
CD53P19397 MBLAC2-202ENST00000514906 1936 ntBASIC13.64□□□□□ -0.23
CD53P19397 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD53P19397 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD53P19397 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD53P19397 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms