Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ERCC2P18074 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ERCC2P18074 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.36■□□□□ 0.05
ERCC2P18074 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
ERCC2P18074 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
ERCC2P18074 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ERCC2P18074 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ERCC2P18074 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.36■□□□□ 0.05
ERCC2P18074 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ERCC2P18074 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.36■□□□□ 0.05
ERCC2P18074 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
ERCC2P18074 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.36■□□□□ 0.05
ERCC2P18074 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ERCC2P18074 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ERCC2P18074 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
ERCC2P18074 AC092135.3-201ENST00000624151 1846 ntBASIC15.36■□□□□ 0.05
ERCC2P18074 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ERCC2P18074 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.36■□□□□ 0.05
ERCC2P18074 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.36■□□□□ 0.05
ERCC2P18074 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERCC2P18074 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERCC2P18074 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.35■□□□□ 0.05
ERCC2P18074 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.35■□□□□ 0.05
ERCC2P18074 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ERCC2P18074 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.35■□□□□ 0.05
ERCC2P18074 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERCC2P18074 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
ERCC2P18074 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
ERCC2P18074 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERCC2P18074 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.35■□□□□ 0.05
ERCC2P18074 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
ERCC2P18074 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ERCC2P18074 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERCC2P18074 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERCC2P18074 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.35■□□□□ 0.05
ERCC2P18074 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ERCC2P18074 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ERCC2P18074 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ERCC2P18074 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERCC2P18074 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERCC2P18074 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERCC2P18074 AC079776.1-201ENST00000401540 1152 ntBASIC15.35■□□□□ 0.05
ERCC2P18074 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERCC2P18074 RN7SKP175-201ENST00000408472 289 ntBASIC15.35■□□□□ 0.05
ERCC2P18074 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ERCC2P18074 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ERCC2P18074 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.35■□□□□ 0.05
ERCC2P18074 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.35■□□□□ 0.05
ERCC2P18074 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.35■□□□□ 0.05
ERCC2P18074 AP000812.2-201ENST00000538934 718 ntBASIC15.35■□□□□ 0.05
ERCC2P18074 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.35■□□□□ 0.05
ERCC2P18074 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.35■□□□□ 0.05
ERCC2P18074 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ERCC2P18074 AL512343.1-201ENST00000605837 169 ntBASIC15.35■□□□□ 0.05
ERCC2P18074 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.35■□□□□ 0.05
ERCC2P18074 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERCC2P18074 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.35■□□□□ 0.05
ERCC2P18074 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ERCC2P18074 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.35■□□□□ 0.05
ERCC2P18074 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
ERCC2P18074 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.35■□□□□ 0.05
ERCC2P18074 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ERCC2P18074 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERCC2P18074 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERCC2P18074 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERCC2P18074 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.35■□□□□ 0.05
ERCC2P18074 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
ERCC2P18074 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERCC2P18074 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.35■□□□□ 0.05
ERCC2P18074 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.35■□□□□ 0.05
ERCC2P18074 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
ERCC2P18074 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.35■□□□□ 0.05
ERCC2P18074 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ERCC2P18074 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
ERCC2P18074 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
ERCC2P18074 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
ERCC2P18074 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ERCC2P18074 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ERCC2P18074 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
ERCC2P18074 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ERCC2P18074 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ERCC2P18074 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.34■□□□□ 0.05
ERCC2P18074 AC007191.1-201ENST00000623179 2995 ntBASIC15.34■□□□□ 0.05
ERCC2P18074 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ERCC2P18074 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ERCC2P18074 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ERCC2P18074 AL354989.2-201ENST00000435838 1540 ntBASIC15.34■□□□□ 0.05
ERCC2P18074 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.34■□□□□ 0.05
ERCC2P18074 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
ERCC2P18074 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ERCC2P18074 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
ERCC2P18074 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ERCC2P18074 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.34■□□□□ 0.05
ERCC2P18074 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ERCC2P18074 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ERCC2P18074 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.34■□□□□ 0.05
ERCC2P18074 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
ERCC2P18074 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.34■□□□□ 0.05
ERCC2P18074 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.34■□□□□ 0.05
ERCC2P18074 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms