Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 AC055876.2-201ENST00000531834 546 ntBASIC16.24■□□□□ 0.19
CCDC172P0C7W6 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 INTS4P2-202ENST00000614726 2019 ntBASIC16.24■□□□□ 0.19
CCDC172P0C7W6 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 SRC-202ENST00000373558 4304 ntTSL 5 BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 AL139094.1-201ENST00000405549 1188 ntBASIC16.23■□□□□ 0.19
CCDC172P0C7W6 AL442647.2-201ENST00000429864 857 ntBASIC16.23■□□□□ 0.19
CCDC172P0C7W6 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 AC114812.1-204ENST00000449669 728 ntBASIC16.23■□□□□ 0.19
CCDC172P0C7W6 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 AC106028.4-201ENST00000614509 607 ntBASIC16.23■□□□□ 0.19
CCDC172P0C7W6 AC023090.2-201ENST00000625182 2110 ntBASIC16.23■□□□□ 0.19
CCDC172P0C7W6 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC172P0C7W6 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CCDC172P0C7W6 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC172P0C7W6 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.22■□□□□ 0.19
CCDC172P0C7W6 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC172P0C7W6 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC16.22■□□□□ 0.19
CCDC172P0C7W6 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC172P0C7W6 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC172P0C7W6 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC172P0C7W6 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC172P0C7W6 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC172P0C7W6 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CCDC172P0C7W6 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC172P0C7W6 KRT8P14-201ENST00000414254 1442 ntBASIC16.22■□□□□ 0.19
CCDC172P0C7W6 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC16.22■□□□□ 0.19
CCDC172P0C7W6 MRPS18AP1-201ENST00000414458 589 ntBASIC16.22■□□□□ 0.19
CCDC172P0C7W6 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.22■□□□□ 0.19
CCDC172P0C7W6 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.22■□□□□ 0.19
CCDC172P0C7W6 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.22■□□□□ 0.19
CCDC172P0C7W6 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.22■□□□□ 0.19
CCDC172P0C7W6 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.22■□□□□ 0.19
CCDC172P0C7W6 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.22■□□□□ 0.19
CCDC172P0C7W6 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC172P0C7W6 AC120045.2-201ENST00000567334 178 ntBASIC16.22■□□□□ 0.19
CCDC172P0C7W6 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.22■□□□□ 0.19
CCDC172P0C7W6 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CCDC172P0C7W6 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms