Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40ALP0C0E4 AC016700.1-201ENST00000429424 312 ntBASIC14.08□□□□□ -0.16
RAB40ALP0C0E4 NKAIN1P1-201ENST00000435754 582 ntBASIC14.08□□□□□ -0.16
RAB40ALP0C0E4 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.08□□□□□ -0.16
RAB40ALP0C0E4 AL358472.3-201ENST00000608147 415 ntBASIC14.08□□□□□ -0.16
RAB40ALP0C0E4 AL136301.1-201ENST00000615830 422 ntBASIC14.08□□□□□ -0.16
RAB40ALP0C0E4 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.08□□□□□ -0.16
RAB40ALP0C0E4 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.08□□□□□ -0.16
RAB40ALP0C0E4 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40ALP0C0E4 MYO15B-237ENST00000642007 4893 ntBASIC14.08□□□□□ -0.16
RAB40ALP0C0E4 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40ALP0C0E4 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RAB40ALP0C0E4 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.08□□□□□ -0.16
RAB40ALP0C0E4 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40ALP0C0E4 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40ALP0C0E4 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 FAM58BP-201ENST00000439056 645 ntBASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 AC106794.1-201ENST00000506935 792 ntBASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 MIR4683-201ENST00000579659 81 ntBASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 MIR3619-201ENST00000579667 83 ntBASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 AC008825.2-201ENST00000603374 718 ntBASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 AC022748.3-201ENST00000621828 275 ntBASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40ALP0C0E4 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40ALP0C0E4 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB40ALP0C0E4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40ALP0C0E4 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
RAB40ALP0C0E4 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40ALP0C0E4 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40ALP0C0E4 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RAB40ALP0C0E4 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB40ALP0C0E4 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40ALP0C0E4 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40ALP0C0E4 AL365209.1-201ENST00000624418 6473 ntBASIC14.06□□□□□ -0.16
RAB40ALP0C0E4 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40ALP0C0E4 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB40ALP0C0E4 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB40ALP0C0E4 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40ALP0C0E4 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40ALP0C0E4 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40ALP0C0E4 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40ALP0C0E4 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.06□□□□□ -0.16
RAB40ALP0C0E4 DPM3-202ENST00000368399 517 ntBASIC14.06□□□□□ -0.16
RAB40ALP0C0E4 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40ALP0C0E4 MIR769-201ENST00000390225 118 ntBASIC14.06□□□□□ -0.16
RAB40ALP0C0E4 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40ALP0C0E4 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.06□□□□□ -0.16
RAB40ALP0C0E4 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.06□□□□□ -0.16
RAB40ALP0C0E4 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40ALP0C0E4 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40ALP0C0E4 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB40ALP0C0E4 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40ALP0C0E4 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.06□□□□□ -0.16
RAB40ALP0C0E4 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.06□□□□□ -0.16
RAB40ALP0C0E4 RN7SL163P-201ENST00000583100 276 ntBASIC14.06□□□□□ -0.16
RAB40ALP0C0E4 BNIP3P13-201ENST00000599968 566 ntBASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms