Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 AL607033.1-201ENST00000623900 1599 ntBASIC13.38□□□□□ -0.27
APOA1P02647 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOA1P02647 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.38□□□□□ -0.27
APOA1P02647 AC012508.2-201ENST00000567613 1472 ntBASIC13.38□□□□□ -0.27
APOA1P02647 AP002414.3-201ENST00000589352 1468 ntBASIC13.38□□□□□ -0.27
APOA1P02647 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
APOA1P02647 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APOA1P02647 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
APOA1P02647 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
APOA1P02647 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOA1P02647 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.38□□□□□ -0.27
APOA1P02647 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.38□□□□□ -0.27
APOA1P02647 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.38□□□□□ -0.27
APOA1P02647 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOA1P02647 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
APOA1P02647 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
APOA1P02647 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.38□□□□□ -0.27
APOA1P02647 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.38□□□□□ -0.27
APOA1P02647 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.38□□□□□ -0.27
APOA1P02647 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC13.38□□□□□ -0.27
APOA1P02647 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.38□□□□□ -0.27
APOA1P02647 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC13.38□□□□□ -0.27
APOA1P02647 AC073648.2-201ENST00000510116 352 ntBASIC13.38□□□□□ -0.27
APOA1P02647 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOA1P02647 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOA1P02647 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.38□□□□□ -0.27
APOA1P02647 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
APOA1P02647 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.38□□□□□ -0.27
APOA1P02647 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APOA1P02647 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
APOA1P02647 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOA1P02647 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOA1P02647 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APOA1P02647 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.38□□□□□ -0.27
APOA1P02647 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.38□□□□□ -0.27
APOA1P02647 FAM90A12P-201ENST00000519497 2375 ntBASIC13.38□□□□□ -0.27
APOA1P02647 FAM90A24P-201ENST00000520792 2369 ntBASIC13.38□□□□□ -0.27
APOA1P02647 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOA1P02647 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.38□□□□□ -0.27
APOA1P02647 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APOA1P02647 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOA1P02647 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOA1P02647 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.38□□□□□ -0.27
APOA1P02647 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOA1P02647 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOA1P02647 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APOA1P02647 INE2-201ENST00000630399 1874 ntBASIC13.38□□□□□ -0.27
APOA1P02647 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC13.38□□□□□ -0.27
APOA1P02647 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOA1P02647 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC13.37□□□□□ -0.27
APOA1P02647 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOA1P02647 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOA1P02647 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
APOA1P02647 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOA1P02647 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOA1P02647 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOA1P02647 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.37□□□□□ -0.27
APOA1P02647 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.37□□□□□ -0.27
APOA1P02647 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOA1P02647 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOA1P02647 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOA1P02647 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOA1P02647 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOA1P02647 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOA1P02647 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOA1P02647 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOA1P02647 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC13.37□□□□□ -0.27
APOA1P02647 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.37□□□□□ -0.27
APOA1P02647 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC13.37□□□□□ -0.27
APOA1P02647 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
APOA1P02647 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.37□□□□□ -0.27
APOA1P02647 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC13.37□□□□□ -0.27
APOA1P02647 AL139010.1-201ENST00000454878 894 ntBASIC13.37□□□□□ -0.27
APOA1P02647 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.37□□□□□ -0.27
APOA1P02647 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.37□□□□□ -0.27
APOA1P02647 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.37□□□□□ -0.27
APOA1P02647 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC13.37□□□□□ -0.27
APOA1P02647 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.37□□□□□ -0.27
APOA1P02647 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOA1P02647 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOA1P02647 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.37□□□□□ -0.27
APOA1P02647 AL161645.1-201ENST00000622716 1255 ntBASIC13.37□□□□□ -0.27
APOA1P02647 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
APOA1P02647 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.37□□□□□ -0.27
APOA1P02647 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
APOA1P02647 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOA1P02647 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOA1P02647 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.37□□□□□ -0.27
APOA1P02647 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOA1P02647 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOA1P02647 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOA1P02647 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
APOA1P02647 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOA1P02647 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOA1P02647 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOA1P02647 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
APOA1P02647 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
APOA1P02647 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOA1P02647 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.36□□□□□ -0.27
APOA1P02647 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms