Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
XRCC2O43543 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
XRCC2O43543 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
XRCC2O43543 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
XRCC2O43543 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
XRCC2O43543 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
XRCC2O43543 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
XRCC2O43543 AC140479.7-201ENST00000636301 2332 ntBASIC13.05□□□□□ -0.32
XRCC2O43543 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
XRCC2O43543 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
XRCC2O43543 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
XRCC2O43543 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
XRCC2O43543 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
XRCC2O43543 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.05□□□□□ -0.32
XRCC2O43543 LINC01230-201ENST00000625222 3017 ntBASIC13.05□□□□□ -0.32
XRCC2O43543 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
XRCC2O43543 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.04□□□□□ -0.32
XRCC2O43543 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
XRCC2O43543 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.04□□□□□ -0.32
XRCC2O43543 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
XRCC2O43543 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
XRCC2O43543 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
XRCC2O43543 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
XRCC2O43543 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
XRCC2O43543 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
XRCC2O43543 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
XRCC2O43543 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
XRCC2O43543 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
XRCC2O43543 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
XRCC2O43543 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
XRCC2O43543 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
XRCC2O43543 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
XRCC2O43543 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
XRCC2O43543 MIR661-201ENST00000384842 89 ntBASIC13.04□□□□□ -0.32
XRCC2O43543 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
XRCC2O43543 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
XRCC2O43543 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
XRCC2O43543 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.04□□□□□ -0.32
XRCC2O43543 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.04□□□□□ -0.32
XRCC2O43543 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
XRCC2O43543 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.04□□□□□ -0.32
XRCC2O43543 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.04□□□□□ -0.32
XRCC2O43543 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
XRCC2O43543 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.04□□□□□ -0.32
XRCC2O43543 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.04□□□□□ -0.32
XRCC2O43543 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.04□□□□□ -0.32
XRCC2O43543 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
XRCC2O43543 KRT8P35-201ENST00000483942 1338 ntBASIC13.04□□□□□ -0.32
XRCC2O43543 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.04□□□□□ -0.32
XRCC2O43543 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
XRCC2O43543 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.04□□□□□ -0.32
XRCC2O43543 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.04□□□□□ -0.32
XRCC2O43543 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
XRCC2O43543 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
XRCC2O43543 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.04□□□□□ -0.32
XRCC2O43543 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
XRCC2O43543 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
XRCC2O43543 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
XRCC2O43543 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.04□□□□□ -0.32
XRCC2O43543 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
XRCC2O43543 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
XRCC2O43543 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
XRCC2O43543 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.03□□□□□ -0.32
XRCC2O43543 AC113367.3-201ENST00000508316 1912 ntBASIC13.03□□□□□ -0.32
XRCC2O43543 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
XRCC2O43543 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
XRCC2O43543 AC079781.5-202ENST00000641784 3743 ntBASIC13.03□□□□□ -0.32
XRCC2O43543 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.03□□□□□ -0.32
XRCC2O43543 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
XRCC2O43543 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
XRCC2O43543 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
XRCC2O43543 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
XRCC2O43543 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
XRCC2O43543 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
XRCC2O43543 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
XRCC2O43543 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
XRCC2O43543 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.03□□□□□ -0.32
XRCC2O43543 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
XRCC2O43543 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
XRCC2O43543 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
XRCC2O43543 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
XRCC2O43543 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
XRCC2O43543 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.03□□□□□ -0.32
XRCC2O43543 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
XRCC2O43543 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
XRCC2O43543 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
XRCC2O43543 AC022137.2-201ENST00000503482 481 ntBASIC13.03□□□□□ -0.32
XRCC2O43543 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.03□□□□□ -0.32
XRCC2O43543 AC190387.1-201ENST00000551683 408 ntBASIC13.03□□□□□ -0.32
XRCC2O43543 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.03□□□□□ -0.32
XRCC2O43543 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.03□□□□□ -0.32
XRCC2O43543 AL355385.1-201ENST00000606123 409 ntBASIC13.03□□□□□ -0.32
XRCC2O43543 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.03□□□□□ -0.32
XRCC2O43543 WFDC1-204ENST00000613603 549 ntBASIC13.03□□□□□ -0.32
XRCC2O43543 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.03□□□□□ -0.32
XRCC2O43543 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
XRCC2O43543 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
XRCC2O43543 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
XRCC2O43543 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
XRCC2O43543 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms