Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 CTBP2P5-201ENST00000454986 1264 ntBASIC14.19□□□□□ -0.14
LRIT2A6NDA9 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.19□□□□□ -0.14
LRIT2A6NDA9 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 AL136172.1-201ENST00000598590 1394 ntBASIC14.19□□□□□ -0.14
LRIT2A6NDA9 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 AC005912.2-201ENST00000619492 2400 ntBASIC14.18□□□□□ -0.14
LRIT2A6NDA9 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 MIR1202-201ENST00000408529 83 ntBASIC14.18□□□□□ -0.14
LRIT2A6NDA9 MIR1909-201ENST00000411312 80 ntBASIC14.18□□□□□ -0.14
LRIT2A6NDA9 AC004945.1-201ENST00000416738 983 ntBASIC14.18□□□□□ -0.14
LRIT2A6NDA9 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 ACA64.2-201ENST00000459014 129 ntBASIC14.18□□□□□ -0.14
LRIT2A6NDA9 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 COX5BP1-201ENST00000507622 393 ntBASIC14.18□□□□□ -0.14
LRIT2A6NDA9 ALG3P1-201ENST00000508806 1114 ntBASIC14.18□□□□□ -0.14
LRIT2A6NDA9 RN7SL713P-201ENST00000582127 302 ntBASIC14.18□□□□□ -0.14
LRIT2A6NDA9 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 MYO15B-237ENST00000642007 4893 ntBASIC14.18□□□□□ -0.14
LRIT2A6NDA9 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 AP001267.2-201ENST00000532619 2086 ntBASIC14.18□□□□□ -0.14
LRIT2A6NDA9 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.18□□□□□ -0.14
LRIT2A6NDA9 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 ANKRD19P-201ENST00000338192 862 ntBASIC14.17□□□□□ -0.14
LRIT2A6NDA9 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 GPR53P-205ENST00000457298 1084 ntBASIC14.17□□□□□ -0.14
LRIT2A6NDA9 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms