Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AC152010.1-201ENST00000415779 2006 ntBASIC16.31■□□□□ 0.2
CCDC66A2RUB6 ACE3P-201ENST00000423435 1973 ntBASIC16.31■□□□□ 0.2
CCDC66A2RUB6 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CCDC66A2RUB6 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC66A2RUB6 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 AL079307.3-201ENST00000556114 283 ntBASIC16.3■□□□□ 0.2
CCDC66A2RUB6 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 MIR6069-201ENST00000620069 79 ntBASIC16.3■□□□□ 0.2
CCDC66A2RUB6 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 Z97205.2-201ENST00000564697 1639 ntBASIC16.3■□□□□ 0.2
CCDC66A2RUB6 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC66A2RUB6 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC66A2RUB6 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC66A2RUB6 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC66A2RUB6 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC66A2RUB6 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC66A2RUB6 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CCDC66A2RUB6 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC66A2RUB6 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC66A2RUB6 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC66A2RUB6 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC66A2RUB6 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC66A2RUB6 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CCDC66A2RUB6 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC66A2RUB6 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC66A2RUB6 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC66A2RUB6 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC66A2RUB6 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC66A2RUB6 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CCDC66A2RUB6 AC074338.1-201ENST00000416825 156 ntBASIC16.29■□□□□ 0.2
CCDC66A2RUB6 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC66A2RUB6 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC66A2RUB6 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC66A2RUB6 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC66A2RUB6 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
CCDC66A2RUB6 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC66A2RUB6 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC66A2RUB6 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC66A2RUB6 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC66A2RUB6 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC66A2RUB6 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC66A2RUB6 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC66A2RUB6 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
CCDC66A2RUB6 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC66A2RUB6 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CCDC66A2RUB6 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC66A2RUB6 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC66A2RUB6 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC66A2RUB6 AC131212.3-201ENST00000624087 4219 ntBASIC16.29■□□□□ 0.2
CCDC66A2RUB6 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC66A2RUB6 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC66A2RUB6 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC66A2RUB6 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC66A2RUB6 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
CCDC66A2RUB6 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC66A2RUB6 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC66A2RUB6 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC66A2RUB6 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC66A2RUB6 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms