Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPDC1A2A3K4 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPDC1A2A3K4 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPDC1A2A3K4 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPDC1A2A3K4 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PTPDC1A2A3K4 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
PTPDC1A2A3K4 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPDC1A2A3K4 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPDC1A2A3K4 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.56■□□□□ 0.4
PTPDC1A2A3K4 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPDC1A2A3K4 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
PTPDC1A2A3K4 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPDC1A2A3K4 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PTPDC1A2A3K4 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPDC1A2A3K4 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.56■□□□□ 0.4
PTPDC1A2A3K4 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPDC1A2A3K4 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTPDC1A2A3K4 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.56■□□□□ 0.4
PTPDC1A2A3K4 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.56■□□□□ 0.4
PTPDC1A2A3K4 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTPDC1A2A3K4 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.56■□□□□ 0.4
PTPDC1A2A3K4 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTPDC1A2A3K4 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.56■□□□□ 0.4
PTPDC1A2A3K4 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.56■□□□□ 0.4
PTPDC1A2A3K4 AC132938.4-201ENST00000623835 848 ntBASIC17.56■□□□□ 0.4
PTPDC1A2A3K4 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPDC1A2A3K4 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPDC1A2A3K4 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPDC1A2A3K4 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC17.56■□□□□ 0.4
PTPDC1A2A3K4 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTPDC1A2A3K4 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPDC1A2A3K4 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.56■□□□□ 0.4
PTPDC1A2A3K4 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.56■□□□□ 0.4
PTPDC1A2A3K4 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPDC1A2A3K4 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PTPDC1A2A3K4 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC17.56■□□□□ 0.4
PTPDC1A2A3K4 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 AL161772.1-201ENST00000610494 4412 ntBASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 AC006001.1-201ENST00000325130 474 ntBASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms