Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 AC004945.1-201ENST00000416738 983 ntBASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 PARP8-218ENST00000513738 596 ntTSL 4 BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 MIR3619-201ENST00000579667 83 ntBASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSX2IPQ9Y2D8 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SSX2IPQ9Y2D8 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC16.09■□□□□ 0.17
SSX2IPQ9Y2D8 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SSX2IPQ9Y2D8 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSX2IPQ9Y2D8 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SSX2IPQ9Y2D8 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SSX2IPQ9Y2D8 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SSX2IPQ9Y2D8 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SSX2IPQ9Y2D8 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SSX2IPQ9Y2D8 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.09■□□□□ 0.17
SSX2IPQ9Y2D8 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SSX2IPQ9Y2D8 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSX2IPQ9Y2D8 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSX2IPQ9Y2D8 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SSX2IPQ9Y2D8 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSX2IPQ9Y2D8 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SSX2IPQ9Y2D8 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SSX2IPQ9Y2D8 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.09■□□□□ 0.17
SSX2IPQ9Y2D8 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC16.09■□□□□ 0.17
SSX2IPQ9Y2D8 HIST2H2BB-201ENST00000449108 381 ntBASIC16.09■□□□□ 0.17
SSX2IPQ9Y2D8 AC021723.1-201ENST00000486306 515 ntBASIC16.09■□□□□ 0.17
SSX2IPQ9Y2D8 HIST2H2BC-201ENST00000498492 580 ntBASIC16.09■□□□□ 0.17
SSX2IPQ9Y2D8 AC005740.2-201ENST00000511085 419 ntBASIC16.09■□□□□ 0.17
SSX2IPQ9Y2D8 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC16.09■□□□□ 0.17
SSX2IPQ9Y2D8 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SSX2IPQ9Y2D8 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SSX2IPQ9Y2D8 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSX2IPQ9Y2D8 AL021578.1-201ENST00000613646 709 ntBASIC16.09■□□□□ 0.17
SSX2IPQ9Y2D8 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSX2IPQ9Y2D8 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.09■□□□□ 0.17
SSX2IPQ9Y2D8 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SSX2IPQ9Y2D8 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSX2IPQ9Y2D8 CLUHP2-201ENST00000426660 1303 ntBASIC16.09■□□□□ 0.17
SSX2IPQ9Y2D8 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSX2IPQ9Y2D8 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSX2IPQ9Y2D8 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.09■□□□□ 0.17
SSX2IPQ9Y2D8 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SSX2IPQ9Y2D8 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SSX2IPQ9Y2D8 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.09■□□□□ 0.17
SSX2IPQ9Y2D8 KRT8P29-201ENST00000420409 1371 ntBASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms