Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HMG20BQ9P0W2 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 AC018442.1-201ENST00000421439 2061 ntBASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 AGER-203ENST00000375065 665 ntTSL 2 BASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 AC010141.1-201ENST00000411585 623 ntBASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 PTPA-218ENST00000435132 618 ntTSL 2 BASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 KC6-205ENST00000599934 556 ntTSL 4 BASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 AC063926.3-201ENST00000624734 5658 ntBASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 GSN-203ENST00000373808 2664 ntTSL 2 BASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
HMG20BQ9P0W2 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC18.11■□□□□ 0.49
HMG20BQ9P0W2 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC18.11■□□□□ 0.49
HMG20BQ9P0W2 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC18.11■□□□□ 0.49
HMG20BQ9P0W2 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC18.11■□□□□ 0.49
HMG20BQ9P0W2 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
HMG20BQ9P0W2 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
HMG20BQ9P0W2 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HMG20BQ9P0W2 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMG20BQ9P0W2 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
HMG20BQ9P0W2 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMG20BQ9P0W2 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMG20BQ9P0W2 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HMG20BQ9P0W2 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
HMG20BQ9P0W2 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
HMG20BQ9P0W2 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMG20BQ9P0W2 NDUFAB1P1-201ENST00000404262 460 ntBASIC18.11■□□□□ 0.49
HMG20BQ9P0W2 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC18.11■□□□□ 0.49
HMG20BQ9P0W2 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMG20BQ9P0W2 AC009955.4-201ENST00000597192 544 ntBASIC18.11■□□□□ 0.49
HMG20BQ9P0W2 AC007663.3-201ENST00000609632 465 ntBASIC18.11■□□□□ 0.49
HMG20BQ9P0W2 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC18.11■□□□□ 0.49
HMG20BQ9P0W2 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMG20BQ9P0W2 E2F3P2-201ENST00000447755 1422 ntBASIC18.11■□□□□ 0.49
HMG20BQ9P0W2 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC18.11■□□□□ 0.49
HMG20BQ9P0W2 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC18.11■□□□□ 0.49
HMG20BQ9P0W2 SHC1P1-201ENST00000425230 1745 ntBASIC18.11■□□□□ 0.49
HMG20BQ9P0W2 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC18.11■□□□□ 0.49
HMG20BQ9P0W2 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMG20BQ9P0W2 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMG20BQ9P0W2 AC232323.1-201ENST00000540724 2099 ntBASIC18.11■□□□□ 0.49
HMG20BQ9P0W2 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HMG20BQ9P0W2 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMG20BQ9P0W2 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC18.11■□□□□ 0.49
HMG20BQ9P0W2 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC18.11■□□□□ 0.49
HMG20BQ9P0W2 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMG20BQ9P0W2 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC18.1■□□□□ 0.49
HMG20BQ9P0W2 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMG20BQ9P0W2 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
HMG20BQ9P0W2 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
HMG20BQ9P0W2 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC18.1■□□□□ 0.49
HMG20BQ9P0W2 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
HMG20BQ9P0W2 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMG20BQ9P0W2 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HMG20BQ9P0W2 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HMG20BQ9P0W2 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC18.1■□□□□ 0.49
HMG20BQ9P0W2 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMG20BQ9P0W2 HNRNPA1P32-201ENST00000396326 963 ntBASIC18.1■□□□□ 0.49
HMG20BQ9P0W2 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC18.1■□□□□ 0.49
HMG20BQ9P0W2 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HMG20BQ9P0W2 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC18.1■□□□□ 0.49
HMG20BQ9P0W2 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
HMG20BQ9P0W2 AC126915.1-201ENST00000522847 1038 ntBASIC18.1■□□□□ 0.49
HMG20BQ9P0W2 AC131206.1-201ENST00000538078 1211 ntBASIC18.1■□□□□ 0.49
HMG20BQ9P0W2 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
HMG20BQ9P0W2 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HMG20BQ9P0W2 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HMG20BQ9P0W2 AL162426.1-201ENST00000624141 743 ntBASIC18.1■□□□□ 0.49
HMG20BQ9P0W2 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC18.1■□□□□ 0.49
HMG20BQ9P0W2 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms