Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
COMMD9Q9P000 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.83□□□□□ -0.36
COMMD9Q9P000 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
COMMD9Q9P000 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.83□□□□□ -0.36
COMMD9Q9P000 AL136982.4-201ENST00000437689 1740 ntBASIC12.83□□□□□ -0.36
COMMD9Q9P000 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
COMMD9Q9P000 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
COMMD9Q9P000 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
COMMD9Q9P000 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
COMMD9Q9P000 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
COMMD9Q9P000 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
COMMD9Q9P000 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
COMMD9Q9P000 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
COMMD9Q9P000 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
COMMD9Q9P000 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
COMMD9Q9P000 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC12.83□□□□□ -0.36
COMMD9Q9P000 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.83□□□□□ -0.36
COMMD9Q9P000 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC12.83□□□□□ -0.36
COMMD9Q9P000 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC12.83□□□□□ -0.36
COMMD9Q9P000 AP000842.3-202ENST00000569238 1080 ntBASIC12.83□□□□□ -0.36
COMMD9Q9P000 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.83□□□□□ -0.36
COMMD9Q9P000 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC12.83□□□□□ -0.36
COMMD9Q9P000 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
COMMD9Q9P000 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.83□□□□□ -0.36
COMMD9Q9P000 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC12.83□□□□□ -0.36
COMMD9Q9P000 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
COMMD9Q9P000 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
COMMD9Q9P000 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
COMMD9Q9P000 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
COMMD9Q9P000 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
COMMD9Q9P000 AC138969.3-201ENST00000546612 1459 ntBASIC12.83□□□□□ -0.36
COMMD9Q9P000 AC138932.2-201ENST00000548268 1459 ntBASIC12.83□□□□□ -0.36
COMMD9Q9P000 AC126755.4-201ENST00000549796 1459 ntBASIC12.83□□□□□ -0.36
COMMD9Q9P000 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.83□□□□□ -0.36
COMMD9Q9P000 AC130686.1-201ENST00000622936 2466 ntBASIC12.83□□□□□ -0.36
COMMD9Q9P000 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
COMMD9Q9P000 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
COMMD9Q9P000 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
COMMD9Q9P000 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
COMMD9Q9P000 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.83□□□□□ -0.36
COMMD9Q9P000 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
COMMD9Q9P000 AC105206.1-202ENST00000314927 2368 ntBASIC12.83□□□□□ -0.36
COMMD9Q9P000 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
COMMD9Q9P000 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
COMMD9Q9P000 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC12.83□□□□□ -0.36
COMMD9Q9P000 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
COMMD9Q9P000 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
COMMD9Q9P000 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
COMMD9Q9P000 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
COMMD9Q9P000 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC12.82□□□□□ -0.36
COMMD9Q9P000 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COMMD9Q9P000 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COMMD9Q9P000 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COMMD9Q9P000 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COMMD9Q9P000 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
COMMD9Q9P000 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
COMMD9Q9P000 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COMMD9Q9P000 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
COMMD9Q9P000 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.82□□□□□ -0.36
COMMD9Q9P000 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC12.82□□□□□ -0.36
COMMD9Q9P000 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COMMD9Q9P000 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COMMD9Q9P000 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COMMD9Q9P000 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
COMMD9Q9P000 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
COMMD9Q9P000 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COMMD9Q9P000 MIR346-201ENST00000362234 95 ntBASIC12.82□□□□□ -0.36
COMMD9Q9P000 ADH5P3-201ENST00000433842 1137 ntBASIC12.82□□□□□ -0.36
COMMD9Q9P000 ELP6-209ENST00000446787 894 ntTSL 3 BASIC12.82□□□□□ -0.36
COMMD9Q9P000 SPDYE11-202ENST00000450699 704 ntBASIC12.82□□□□□ -0.36
COMMD9Q9P000 KRT18P3-201ENST00000451602 1288 ntBASIC12.82□□□□□ -0.36
COMMD9Q9P000 IGHV3-62-201ENST00000520057 340 ntBASIC12.82□□□□□ -0.36
COMMD9Q9P000 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC12.82□□□□□ -0.36
COMMD9Q9P000 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC12.82□□□□□ -0.36
COMMD9Q9P000 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC12.82□□□□□ -0.36
COMMD9Q9P000 COQ9-214ENST00000567933 882 ntTSL 3 BASIC12.82□□□□□ -0.36
COMMD9Q9P000 SPDYE9P-201ENST00000570642 692 ntBASIC12.82□□□□□ -0.36
COMMD9Q9P000 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
COMMD9Q9P000 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC12.82□□□□□ -0.36
COMMD9Q9P000 SPDYE10P-202ENST00000612005 668 ntBASIC12.82□□□□□ -0.36
COMMD9Q9P000 SPDYE8P-202ENST00000612377 668 ntBASIC12.82□□□□□ -0.36
COMMD9Q9P000 AC092865.6-201ENST00000642101 219 ntBASIC12.82□□□□□ -0.36
COMMD9Q9P000 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.82□□□□□ -0.36
COMMD9Q9P000 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
COMMD9Q9P000 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COMMD9Q9P000 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.82□□□□□ -0.36
COMMD9Q9P000 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
COMMD9Q9P000 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
COMMD9Q9P000 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
COMMD9Q9P000 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
COMMD9Q9P000 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COMMD9Q9P000 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.82□□□□□ -0.36
COMMD9Q9P000 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
COMMD9Q9P000 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
COMMD9Q9P000 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COMMD9Q9P000 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COMMD9Q9P000 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.82□□□□□ -0.36
COMMD9Q9P000 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.82□□□□□ -0.36
COMMD9Q9P000 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COMMD9Q9P000 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms