Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC106881.1-201ENST00000605849 3329 ntBASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CUEDC1Q9NWM3 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.52□□□□□ -0.08
CUEDC1Q9NWM3 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CUEDC1Q9NWM3 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.52□□□□□ -0.08
CUEDC1Q9NWM3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.52□□□□□ -0.08
CUEDC1Q9NWM3 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CUEDC1Q9NWM3 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CUEDC1Q9NWM3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CUEDC1Q9NWM3 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.52□□□□□ -0.08
CUEDC1Q9NWM3 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CUEDC1Q9NWM3 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.52□□□□□ -0.08
CUEDC1Q9NWM3 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CUEDC1Q9NWM3 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CUEDC1Q9NWM3 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CUEDC1Q9NWM3 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.52□□□□□ -0.08
CUEDC1Q9NWM3 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CUEDC1Q9NWM3 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 SSR1P1-201ENST00000407630 814 ntBASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 RNA5SP412-201ENST00000516234 123 ntBASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 AC005786.4-201ENST00000623369 682 ntBASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 AL603764.1-201ENST00000636452 321 ntBASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CUEDC1Q9NWM3 AC007686.3-201ENST00000619017 3487 ntBASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 PCDHA3-202ENST00000532566 4594 ntBASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 FAM197Y7-201ENST00000432892 766 ntBASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 AC007551.1-201ENST00000457394 519 ntBASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 ECM1P1-201ENST00000604092 1279 ntBASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 ENPP7P14-201ENST00000621765 1040 ntBASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms