Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ABCA3Q99758 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ABCA3Q99758 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ABCA3Q99758 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC19.1■□□□□ 0.65
ABCA3Q99758 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.1■□□□□ 0.65
ABCA3Q99758 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC19.1■□□□□ 0.65
ABCA3Q99758 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ABCA3Q99758 AC023906.1-201ENST00000486386 453 ntBASIC19.1■□□□□ 0.65
ABCA3Q99758 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC19.1■□□□□ 0.65
ABCA3Q99758 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC19.1■□□□□ 0.65
ABCA3Q99758 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC19.1■□□□□ 0.65
ABCA3Q99758 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC19.1■□□□□ 0.65
ABCA3Q99758 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC19.1■□□□□ 0.65
ABCA3Q99758 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ABCA3Q99758 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC19.1■□□□□ 0.65
ABCA3Q99758 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ABCA3Q99758 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ABCA3Q99758 SF1-209ENST00000433274 2317 ntTSL 2 BASIC19.1■□□□□ 0.65
ABCA3Q99758 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ABCA3Q99758 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
ABCA3Q99758 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC19.09■□□□□ 0.65
ABCA3Q99758 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC19.09■□□□□ 0.65
ABCA3Q99758 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ABCA3Q99758 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ABCA3Q99758 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ABCA3Q99758 AL080243.1-201ENST00000423293 1060 ntBASIC19.09■□□□□ 0.65
ABCA3Q99758 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC19.09■□□□□ 0.65
ABCA3Q99758 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC19.09■□□□□ 0.65
ABCA3Q99758 BCRP4-201ENST00000506079 804 ntBASIC19.09■□□□□ 0.65
ABCA3Q99758 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ABCA3Q99758 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC19.09■□□□□ 0.65
ABCA3Q99758 EMC4-208ENST00000559078 599 ntTSL 3 BASIC19.09■□□□□ 0.65
ABCA3Q99758 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC19.09■□□□□ 0.65
ABCA3Q99758 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC19.09■□□□□ 0.65
ABCA3Q99758 AC080013.5-201ENST00000607044 679 ntBASIC19.09■□□□□ 0.65
ABCA3Q99758 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ABCA3Q99758 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ABCA3Q99758 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ABCA3Q99758 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ABCA3Q99758 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ABCA3Q99758 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ABCA3Q99758 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ABCA3Q99758 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC19.09■□□□□ 0.65
ABCA3Q99758 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
ABCA3Q99758 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ABCA3Q99758 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.09■□□□□ 0.65
ABCA3Q99758 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ABCA3Q99758 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ABCA3Q99758 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ABCA3Q99758 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.09■□□□□ 0.65
ABCA3Q99758 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ABCA3Q99758 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ABCA3Q99758 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ABCA3Q99758 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ABCA3Q99758 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ABCA3Q99758 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
ABCA3Q99758 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC19.08■□□□□ 0.65
ABCA3Q99758 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
ABCA3Q99758 CTBP2P6-201ENST00000526402 1229 ntBASIC19.08■□□□□ 0.65
ABCA3Q99758 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC19.08■□□□□ 0.65
ABCA3Q99758 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
ABCA3Q99758 AC126755.5-201ENST00000622756 267 ntBASIC19.08■□□□□ 0.65
ABCA3Q99758 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
ABCA3Q99758 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ABCA3Q99758 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
ABCA3Q99758 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.08■□□□□ 0.65
ABCA3Q99758 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.08■□□□□ 0.65
ABCA3Q99758 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ABCA3Q99758 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
ABCA3Q99758 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ABCA3Q99758 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
ABCA3Q99758 AC064801.2-201ENST00000625052 1303 ntBASIC19.08■□□□□ 0.65
ABCA3Q99758 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
ABCA3Q99758 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ABCA3Q99758 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
ABCA3Q99758 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
ABCA3Q99758 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
ABCA3Q99758 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
ABCA3Q99758 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
ABCA3Q99758 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ABCA3Q99758 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ABCA3Q99758 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ABCA3Q99758 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC19.08■□□□□ 0.64
ABCA3Q99758 AC027612.2-202ENST00000445955 1199 ntBASIC19.08■□□□□ 0.64
ABCA3Q99758 SLC25A15P3-201ENST00000505530 290 ntBASIC19.08■□□□□ 0.64
ABCA3Q99758 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC19.08■□□□□ 0.64
ABCA3Q99758 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC19.08■□□□□ 0.64
ABCA3Q99758 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC19.08■□□□□ 0.64
ABCA3Q99758 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
ABCA3Q99758 AL031673.1-201ENST00000611460 466 ntBASIC19.08■□□□□ 0.64
ABCA3Q99758 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
ABCA3Q99758 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ABCA3Q99758 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
ABCA3Q99758 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ABCA3Q99758 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ABCA3Q99758 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ABCA3Q99758 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ABCA3Q99758 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ABCA3Q99758 AC026691.1-201ENST00000602502 2017 ntBASIC19.07■□□□□ 0.64
ABCA3Q99758 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms