Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 ISCA2P1-201ENST00000425548 448 ntBASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 TNRC18P2-201ENST00000417666 2714 ntBASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 PDIA3P2-201ENST00000428073 158 ntBASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 RCC2P8-201ENST00000502779 1035 ntBASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 ALG3P1-201ENST00000508806 1114 ntBASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 AC103988.2-201ENST00000561804 725 ntBASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 AC020922.3-201ENST00000595064 547 ntBASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 NAP1L6-202ENST00000641404 1222 ntBASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SYNGAP1Q96PV0 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
SYNGAP1Q96PV0 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 AC244394.1-201ENST00000435000 1665 ntBASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 AL008718.2-201ENST00000609206 1313 ntBASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 AL355334.1-201ENST00000417713 215 ntBASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms