Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 AC009955.4-201ENST00000597192 544 ntBASIC17.52■□□□□ 0.4
STAG1Q8WVM7 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
STAG1Q8WVM7 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
STAG1Q8WVM7 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
STAG1Q8WVM7 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
STAG1Q8WVM7 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
STAG1Q8WVM7 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC17.52■□□□□ 0.39
STAG1Q8WVM7 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.51■□□□□ 0.39
STAG1Q8WVM7 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
STAG1Q8WVM7 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
STAG1Q8WVM7 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.51■□□□□ 0.39
STAG1Q8WVM7 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.51■□□□□ 0.39
STAG1Q8WVM7 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
STAG1Q8WVM7 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
STAG1Q8WVM7 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
STAG1Q8WVM7 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
STAG1Q8WVM7 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.51■□□□□ 0.39
STAG1Q8WVM7 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC17.51■□□□□ 0.39
STAG1Q8WVM7 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
STAG1Q8WVM7 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
STAG1Q8WVM7 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.51■□□□□ 0.39
STAG1Q8WVM7 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
STAG1Q8WVM7 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
STAG1Q8WVM7 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.51■□□□□ 0.39
STAG1Q8WVM7 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
STAG1Q8WVM7 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
STAG1Q8WVM7 MIR663B-201ENST00000408361 115 ntBASIC17.51■□□□□ 0.39
STAG1Q8WVM7 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.51■□□□□ 0.39
STAG1Q8WVM7 AC006033.1-201ENST00000440505 426 ntBASIC17.51■□□□□ 0.39
STAG1Q8WVM7 AC104306.2-201ENST00000451877 341 ntBASIC17.51■□□□□ 0.39
STAG1Q8WVM7 CICP12-201ENST00000455801 843 ntBASIC17.51■□□□□ 0.39
STAG1Q8WVM7 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.51■□□□□ 0.39
STAG1Q8WVM7 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
STAG1Q8WVM7 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
STAG1Q8WVM7 AC103988.2-201ENST00000561804 725 ntBASIC17.51■□□□□ 0.39
STAG1Q8WVM7 AP002414.2-201ENST00000591780 3365 ntBASIC17.51■□□□□ 0.39
STAG1Q8WVM7 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
STAG1Q8WVM7 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
STAG1Q8WVM7 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
STAG1Q8WVM7 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
STAG1Q8WVM7 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
STAG1Q8WVM7 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
STAG1Q8WVM7 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
STAG1Q8WVM7 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
STAG1Q8WVM7 F10-203ENST00000409306 1450 ntTSL 3 BASIC17.5■□□□□ 0.39
STAG1Q8WVM7 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
STAG1Q8WVM7 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
STAG1Q8WVM7 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
STAG1Q8WVM7 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
STAG1Q8WVM7 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
STAG1Q8WVM7 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
STAG1Q8WVM7 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.5■□□□□ 0.39
STAG1Q8WVM7 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
STAG1Q8WVM7 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
STAG1Q8WVM7 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
STAG1Q8WVM7 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
STAG1Q8WVM7 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
STAG1Q8WVM7 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
STAG1Q8WVM7 E2F3P2-201ENST00000447755 1422 ntBASIC17.5■□□□□ 0.39
STAG1Q8WVM7 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
STAG1Q8WVM7 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.5■□□□□ 0.39
STAG1Q8WVM7 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
STAG1Q8WVM7 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
STAG1Q8WVM7 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.5■□□□□ 0.39
STAG1Q8WVM7 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.5■□□□□ 0.39
STAG1Q8WVM7 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.5■□□□□ 0.39
STAG1Q8WVM7 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
STAG1Q8WVM7 ZNF767P-206ENST00000513792 565 ntBASIC17.5■□□□□ 0.39
STAG1Q8WVM7 DUX4L46-201ENST00000566845 751 ntBASIC17.5■□□□□ 0.39
STAG1Q8WVM7 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.5■□□□□ 0.39
STAG1Q8WVM7 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
STAG1Q8WVM7 AC243960.2-201ENST00000600996 747 ntBASIC17.5■□□□□ 0.39
STAG1Q8WVM7 AC244093.1-201ENST00000610837 814 ntBASIC17.5■□□□□ 0.39
STAG1Q8WVM7 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
STAG1Q8WVM7 AC005695.3-201ENST00000614522 232 ntBASIC17.5■□□□□ 0.39
STAG1Q8WVM7 AL096828.3-201ENST00000615354 462 ntBASIC17.5■□□□□ 0.39
STAG1Q8WVM7 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC17.5■□□□□ 0.39
STAG1Q8WVM7 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC17.5■□□□□ 0.39
STAG1Q8WVM7 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
STAG1Q8WVM7 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
STAG1Q8WVM7 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
STAG1Q8WVM7 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
STAG1Q8WVM7 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.5■□□□□ 0.39
STAG1Q8WVM7 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.5■□□□□ 0.39
STAG1Q8WVM7 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.5■□□□□ 0.39
STAG1Q8WVM7 AC139712.1-201ENST00000378256 1875 ntBASIC17.5■□□□□ 0.39
STAG1Q8WVM7 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
STAG1Q8WVM7 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
STAG1Q8WVM7 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
STAG1Q8WVM7 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.49■□□□□ 0.39
STAG1Q8WVM7 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
STAG1Q8WVM7 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
STAG1Q8WVM7 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
STAG1Q8WVM7 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
STAG1Q8WVM7 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
STAG1Q8WVM7 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
STAG1Q8WVM7 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
STAG1Q8WVM7 MIR1247-201ENST00000408206 136 ntBASIC17.49■□□□□ 0.39
STAG1Q8WVM7 GPAA1P2-201ENST00000417923 928 ntBASIC17.49■□□□□ 0.39
STAG1Q8WVM7 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 1884.7 ms