Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 DRG2-220ENST00000583355 891 ntTSL 3 BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 SSR4P1-203ENST00000599569 2260 ntBASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 AC112693.3-201ENST00000624819 1983 ntBASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 HNRNPA1P25-201ENST00000422644 937 ntBASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 TREX1-203ENST00000456089 629 ntTSL 3 BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 BATF-202ENST00000555504 361 ntTSL 2 BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 HNRNPA1P16-201ENST00000575692 955 ntBASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 NT5C-204ENST00000578337 582 ntTSL 2 BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 HCG18-241ENST00000602290 821 ntTSL 2 BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 AL365181.1-201ENST00000564032 1828 ntBASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 NME2-201ENST00000393183 568 ntTSL 2 BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 NRADDP-201ENST00000437305 691 ntBASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 RN7SL846P-201ENST00000467429 292 ntBASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 AL356000.1-201ENST00000441073 1238 ntBASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 AC145285.5-201ENST00000562217 361 ntBASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 PSME2-217ENST00000615264 874 ntTSL 5 BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 PSME2-218ENST00000630027 185 ntTSL 3 BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 ESR1-214ENST00000638569 132 ntTSL 5 BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms