Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 MIR3197-201ENST00000582241 73 ntBASIC14.16□□□□□ -0.14
CCDC116Q8IYX3 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
CCDC116Q8IYX3 RPSAP52-203ENST00000622976 1023 ntBASIC14.16□□□□□ -0.14
CCDC116Q8IYX3 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.16□□□□□ -0.14
CCDC116Q8IYX3 AL603764.1-201ENST00000636452 321 ntBASIC14.16□□□□□ -0.14
CCDC116Q8IYX3 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
CCDC116Q8IYX3 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.16□□□□□ -0.14
CCDC116Q8IYX3 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC116Q8IYX3 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC116Q8IYX3 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC116Q8IYX3 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.16□□□□□ -0.14
CCDC116Q8IYX3 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.16□□□□□ -0.14
CCDC116Q8IYX3 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC116Q8IYX3 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 AC113367.3-201ENST00000508316 1912 ntBASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 AC012441.1-201ENST00000446669 685 ntBASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 RN7SL837P-201ENST00000463010 287 ntBASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 AL034417.3-201ENST00000641100 1043 ntBASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 AC097359.2-201ENST00000604992 2389 ntBASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC116Q8IYX3 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
CCDC116Q8IYX3 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms