Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 AC135782.3-201ENST00000562782 2105 ntBASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 UPK3BP1-201ENST00000428678 509 ntBASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 UNC93B7-201ENST00000509439 705 ntBASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 AC105233.2-201ENST00000523697 349 ntBASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 AF228730.5-201ENST00000530288 346 ntBASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 TPM1-226ENST00000560959 925 ntTSL 2 BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 ARL16-209ENST00000573715 763 ntTSL 3 BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 ARL16-211ENST00000576135 694 ntTSL 3 BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 AC011498.7-201ENST00000624986 2027 ntBASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
LYSMD2Q8IV50 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
LYSMD2Q8IV50 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
LYSMD2Q8IV50 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.15□□□□□ -0.31
LYSMD2Q8IV50 AC107375.1-201ENST00000564464 2231 ntBASIC13.15□□□□□ -0.31
LYSMD2Q8IV50 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 AC136604.1-201ENST00000418535 575 ntBASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 AC098831.1-202ENST00000438821 336 ntBASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 SDHD-206ENST00000528182 754 ntTSL 3 BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 AL121912.1-201ENST00000603683 238 ntBASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 AC004877.2-201ENST00000623941 599 ntBASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms