Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 AC107890.1-201ENST00000422478 521 ntBASIC13.17□□□□□ -0.3
C11orf88Q6PI97 SPCS2P4-201ENST00000436160 681 ntBASIC13.17□□□□□ -0.3
C11orf88Q6PI97 KLF2P3-201ENST00000451977 1087 ntBASIC13.17□□□□□ -0.3
C11orf88Q6PI97 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 Z92544.3-201ENST00000624747 417 ntBASIC13.17□□□□□ -0.3
C11orf88Q6PI97 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 UXT-AS1-201ENST00000590504 1525 ntBASIC13.17□□□□□ -0.3
C11orf88Q6PI97 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 TUBB3P1-201ENST00000405796 1332 ntBASIC13.16□□□□□ -0.3
C11orf88Q6PI97 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 RPL5P21-201ENST00000404620 815 ntBASIC13.16□□□□□ -0.3
C11orf88Q6PI97 RBPMS2P1-201ENST00000437762 623 ntBASIC13.16□□□□□ -0.3
C11orf88Q6PI97 BCRP1-201ENST00000444246 691 ntBASIC13.16□□□□□ -0.3
C11orf88Q6PI97 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 AC140878.1-201ENST00000565277 250 ntBASIC13.16□□□□□ -0.3
C11orf88Q6PI97 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 AC051619.7-201ENST00000568314 623 ntBASIC13.16□□□□□ -0.3
C11orf88Q6PI97 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 AC024267.1-201ENST00000582320 895 ntBASIC13.16□□□□□ -0.3
C11orf88Q6PI97 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms