Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC14.22□□□□□ -0.13
RIF1Q5UIP0 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RIF1Q5UIP0 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
RIF1Q5UIP0 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RIF1Q5UIP0 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RIF1Q5UIP0 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RIF1Q5UIP0 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RIF1Q5UIP0 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.22□□□□□ -0.13
RIF1Q5UIP0 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RIF1Q5UIP0 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RIF1Q5UIP0 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
RIF1Q5UIP0 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 RN7SL147P-201ENST00000487345 298 ntBASIC14.21□□□□□ -0.13
RIF1Q5UIP0 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 NF1P11-201ENST00000621292 1282 ntBASIC14.21□□□□□ -0.13
RIF1Q5UIP0 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.21□□□□□ -0.13
RIF1Q5UIP0 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 AP002353.1-201ENST00000528257 1599 ntBASIC14.21□□□□□ -0.13
RIF1Q5UIP0 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 CELP-201ENST00000411440 1249 ntTSL 5 BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 OR8T1P-201ENST00000421347 918 ntBASIC14.21□□□□□ -0.13
RIF1Q5UIP0 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 AL035414.1-201ENST00000451327 857 ntBASIC14.21□□□□□ -0.13
RIF1Q5UIP0 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 RN7SL578P-201ENST00000477781 283 ntBASIC14.21□□□□□ -0.13
RIF1Q5UIP0 RN7SL767P-201ENST00000493013 295 ntBASIC14.21□□□□□ -0.13
RIF1Q5UIP0 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC14.21□□□□□ -0.13
RIF1Q5UIP0 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RIF1Q5UIP0 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
RIF1Q5UIP0 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.21□□□□□ -0.14
RIF1Q5UIP0 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.21□□□□□ -0.14
RIF1Q5UIP0 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RIF1Q5UIP0 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RIF1Q5UIP0 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.21□□□□□ -0.14
RIF1Q5UIP0 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
RIF1Q5UIP0 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RIF1Q5UIP0 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.21□□□□□ -0.14
RIF1Q5UIP0 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RIF1Q5UIP0 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
RIF1Q5UIP0 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 PGAM1P11-201ENST00000416729 680 ntBASIC14.2□□□□□ -0.14
RIF1Q5UIP0 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 AL512599.1-201ENST00000430724 685 ntBASIC14.2□□□□□ -0.14
RIF1Q5UIP0 DUX4L50-201ENST00000455245 715 ntBASIC14.2□□□□□ -0.14
RIF1Q5UIP0 RN7SL440P-201ENST00000577855 343 ntBASIC14.2□□□□□ -0.14
RIF1Q5UIP0 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 BX088702.1-201ENST00000610784 235 ntBASIC14.2□□□□□ -0.14
RIF1Q5UIP0 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 TEKT4P2-202ENST00000559466 1312 ntBASIC14.2□□□□□ -0.14
RIF1Q5UIP0 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 AC003102.2-201ENST00000589195 1469 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms