Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
IRX3P78415 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IRX3P78415 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
IRX3P78415 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.45■□□□□ 0.38
IRX3P78415 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
IRX3P78415 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
IRX3P78415 AC004899.1-201ENST00000424687 1714 ntBASIC17.45■□□□□ 0.38
IRX3P78415 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.45■□□□□ 0.38
IRX3P78415 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
IRX3P78415 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IRX3P78415 AC091046.1-201ENST00000331871 207 ntBASIC17.45■□□□□ 0.38
IRX3P78415 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
IRX3P78415 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.45■□□□□ 0.38
IRX3P78415 ACTG1P2-201ENST00000415776 1125 ntBASIC17.45■□□□□ 0.38
IRX3P78415 ACTG1P11-201ENST00000425411 1125 ntBASIC17.45■□□□□ 0.38
IRX3P78415 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.45■□□□□ 0.38
IRX3P78415 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.45■□□□□ 0.38
IRX3P78415 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.45■□□□□ 0.38
IRX3P78415 AC134698.3-201ENST00000523880 214 ntBASIC17.45■□□□□ 0.38
IRX3P78415 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
IRX3P78415 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC17.45■□□□□ 0.38
IRX3P78415 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IRX3P78415 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC17.45■□□□□ 0.38
IRX3P78415 AC100827.2-201ENST00000563214 1194 ntBASIC17.45■□□□□ 0.38
IRX3P78415 MIR4706-201ENST00000582134 82 ntBASIC17.45■□□□□ 0.38
IRX3P78415 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC17.45■□□□□ 0.38
IRX3P78415 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
IRX3P78415 AC002472.3-201ENST00000640124 621 ntBASIC17.45■□□□□ 0.38
IRX3P78415 AL805961.1-203ENST00000641078 1258 ntBASIC17.45■□□□□ 0.38
IRX3P78415 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.45■□□□□ 0.38
IRX3P78415 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.45■□□□□ 0.38
IRX3P78415 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IRX3P78415 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
IRX3P78415 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.45■□□□□ 0.38
IRX3P78415 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
IRX3P78415 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IRX3P78415 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IRX3P78415 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IRX3P78415 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
IRX3P78415 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IRX3P78415 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IRX3P78415 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IRX3P78415 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IRX3P78415 AL157414.3-201ENST00000624276 1954 ntBASIC17.44■□□□□ 0.38
IRX3P78415 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IRX3P78415 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IRX3P78415 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IRX3P78415 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IRX3P78415 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IRX3P78415 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC17.44■□□□□ 0.38
IRX3P78415 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IRX3P78415 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.44■□□□□ 0.38
IRX3P78415 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.44■□□□□ 0.38
IRX3P78415 AC107918.4-201ENST00000641966 3141 ntBASIC17.44■□□□□ 0.38
IRX3P78415 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IRX3P78415 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
IRX3P78415 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
IRX3P78415 AC005252.3-201ENST00000623855 2258 ntBASIC17.44■□□□□ 0.38
IRX3P78415 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.44■□□□□ 0.38
IRX3P78415 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IRX3P78415 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.44■□□□□ 0.38
IRX3P78415 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
IRX3P78415 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.44■□□□□ 0.38
IRX3P78415 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC17.44■□□□□ 0.38
IRX3P78415 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC17.44■□□□□ 0.38
IRX3P78415 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.44■□□□□ 0.38
IRX3P78415 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC17.44■□□□□ 0.38
IRX3P78415 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC17.44■□□□□ 0.38
IRX3P78415 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.44■□□□□ 0.38
IRX3P78415 AC104073.2-201ENST00000453737 312 ntBASIC17.44■□□□□ 0.38
IRX3P78415 NUP210P1-202ENST00000504322 710 ntBASIC17.44■□□□□ 0.38
IRX3P78415 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17.44■□□□□ 0.38
IRX3P78415 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC17.44■□□□□ 0.38
IRX3P78415 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IRX3P78415 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
IRX3P78415 AL358472.3-201ENST00000608147 415 ntBASIC17.44■□□□□ 0.38
IRX3P78415 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC17.44■□□□□ 0.38
IRX3P78415 AL353726.2-201ENST00000623259 884 ntBASIC17.44■□□□□ 0.38
IRX3P78415 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IRX3P78415 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IRX3P78415 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IRX3P78415 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
IRX3P78415 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
IRX3P78415 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IRX3P78415 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IRX3P78415 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IRX3P78415 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IRX3P78415 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IRX3P78415 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
IRX3P78415 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.44■□□□□ 0.38
IRX3P78415 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
IRX3P78415 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IRX3P78415 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
IRX3P78415 AL360270.3-201ENST00000609118 1348 ntBASIC17.44■□□□□ 0.38
IRX3P78415 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
IRX3P78415 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IRX3P78415 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC17.44■□□□□ 0.38
IRX3P78415 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IRX3P78415 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
IRX3P78415 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms