Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
HIST1H3AP68431 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
HIST1H3AP68431 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HIST1H3AP68431 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
HIST1H3AP68431 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
HIST1H3AP68431 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.07□□□□□ -0.32
HIST1H3AP68431 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HIST1H3AP68431 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.07□□□□□ -0.32
HIST1H3AP68431 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
HIST1H3AP68431 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HIST1H3AP68431 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HIST1H3AP68431 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.07□□□□□ -0.32
HIST1H3AP68431 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
HIST1H3AP68431 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H3AP68431 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H3AP68431 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H3AP68431 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
HIST1H3AP68431 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.06□□□□□ -0.32
HIST1H3AP68431 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.06□□□□□ -0.32
HIST1H3AP68431 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H3AP68431 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H3AP68431 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
HIST1H3AP68431 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H3AP68431 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.06□□□□□ -0.32
HIST1H3AP68431 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.06□□□□□ -0.32
HIST1H3AP68431 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H3AP68431 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.06□□□□□ -0.32
HIST1H3AP68431 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H3AP68431 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H3AP68431 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
HIST1H3AP68431 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H3AP68431 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H3AP68431 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
HIST1H3AP68431 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H3AP68431 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.06□□□□□ -0.32
HIST1H3AP68431 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.06□□□□□ -0.32
HIST1H3AP68431 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.06□□□□□ -0.32
HIST1H3AP68431 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H3AP68431 GCOM2-201ENST00000509133 1104 ntBASIC13.06□□□□□ -0.32
HIST1H3AP68431 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.06□□□□□ -0.32
HIST1H3AP68431 AP001889.1-201ENST00000525414 633 ntBASIC13.06□□□□□ -0.32
HIST1H3AP68431 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
HIST1H3AP68431 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
HIST1H3AP68431 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.06□□□□□ -0.32
HIST1H3AP68431 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
HIST1H3AP68431 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.06□□□□□ -0.32
HIST1H3AP68431 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H3AP68431 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H3AP68431 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.06□□□□□ -0.32
HIST1H3AP68431 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.06□□□□□ -0.32
HIST1H3AP68431 AC027307.3-201ENST00000594262 1100 ntBASIC13.06□□□□□ -0.32
HIST1H3AP68431 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H3AP68431 AC138466.3-201ENST00000619983 221 ntBASIC13.06□□□□□ -0.32
HIST1H3AP68431 AC132938.4-201ENST00000623835 848 ntBASIC13.06□□□□□ -0.32
HIST1H3AP68431 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.06□□□□□ -0.32
HIST1H3AP68431 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.06□□□□□ -0.32
HIST1H3AP68431 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H3AP68431 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H3AP68431 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.06□□□□□ -0.32
HIST1H3AP68431 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H3AP68431 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H3AP68431 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H3AP68431 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H3AP68431 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H3AP68431 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
HIST1H3AP68431 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H3AP68431 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
HIST1H3AP68431 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.06□□□□□ -0.32
HIST1H3AP68431 MYO15B-237ENST00000642007 4893 ntBASIC13.06□□□□□ -0.32
HIST1H3AP68431 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H3AP68431 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H3AP68431 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H3AP68431 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H3AP68431 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.05□□□□□ -0.32
HIST1H3AP68431 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
HIST1H3AP68431 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H3AP68431 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H3AP68431 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H3AP68431 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.05□□□□□ -0.32
HIST1H3AP68431 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.05□□□□□ -0.32
HIST1H3AP68431 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.05□□□□□ -0.32
HIST1H3AP68431 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H3AP68431 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.05□□□□□ -0.32
HIST1H3AP68431 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H3AP68431 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.05□□□□□ -0.32
HIST1H3AP68431 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.05□□□□□ -0.32
HIST1H3AP68431 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
HIST1H3AP68431 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
HIST1H3AP68431 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.05□□□□□ -0.32
HIST1H3AP68431 AC092135.3-201ENST00000624151 1846 ntBASIC13.05□□□□□ -0.32
HIST1H3AP68431 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H3AP68431 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H3AP68431 AC005229.1-201ENST00000392885 409 ntBASIC13.05□□□□□ -0.32
HIST1H3AP68431 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.05□□□□□ -0.32
HIST1H3AP68431 RN7SL837P-201ENST00000463010 287 ntBASIC13.05□□□□□ -0.32
HIST1H3AP68431 AC011495.1-201ENST00000498085 584 ntBASIC13.05□□□□□ -0.32
HIST1H3AP68431 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.05□□□□□ -0.32
HIST1H3AP68431 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.05□□□□□ -0.32
HIST1H3AP68431 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
HIST1H3AP68431 GNRHR2-203ENST00000581100 1187 ntBASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms