Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC10.6□□□□□ -0.71
CKS1BP61024 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC10.6□□□□□ -0.71
CKS1BP61024 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
CKS1BP61024 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC10.6□□□□□ -0.71
CKS1BP61024 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
CKS1BP61024 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC10.6□□□□□ -0.71
CKS1BP61024 AL773604.1-201ENST00000617417 272 ntBASIC10.6□□□□□ -0.71
CKS1BP61024 MED16-214ENST00000617672 554 ntTSL 5 BASIC10.6□□□□□ -0.71
CKS1BP61024 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC10.6□□□□□ -0.71
CKS1BP61024 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC10.6□□□□□ -0.71
CKS1BP61024 FAM215A-202ENST00000632077 792 ntBASIC10.6□□□□□ -0.71
CKS1BP61024 AC010507.1-201ENST00000633895 436 ntBASIC10.6□□□□□ -0.71
CKS1BP61024 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS1BP61024 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC10.6□□□□□ -0.71
CKS1BP61024 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS1BP61024 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS1BP61024 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
CKS1BP61024 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC10.6□□□□□ -0.71
CKS1BP61024 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS1BP61024 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
CKS1BP61024 SRRT-216ENST00000618262 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS1BP61024 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS1BP61024 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS1BP61024 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC10.6□□□□□ -0.71
CKS1BP61024 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS1BP61024 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS1BP61024 FLII-221ENST00000578558 2377 ntTSL 5 BASIC10.6□□□□□ -0.71
CKS1BP61024 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS1BP61024 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS1BP61024 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CKS1BP61024 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CKS1BP61024 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS1BP61024 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC10.6□□□□□ -0.71
CKS1BP61024 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS1BP61024 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
CKS1BP61024 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
CKS1BP61024 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CKS1BP61024 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS1BP61024 GPI-205ENST00000586425 1799 ntTSL 5 BASIC10.6□□□□□ -0.71
CKS1BP61024 AC112693.3-201ENST00000624819 1983 ntBASIC10.59□□□□□ -0.71
CKS1BP61024 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC10.59□□□□□ -0.71
CKS1BP61024 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
CKS1BP61024 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
CKS1BP61024 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC10.59□□□□□ -0.71
CKS1BP61024 DLEC1-201ENST00000308059 6426 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CKS1BP61024 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC10.59□□□□□ -0.71
CKS1BP61024 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
CKS1BP61024 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CKS1BP61024 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC10.59□□□□□ -0.71
CKS1BP61024 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
CKS1BP61024 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CKS1BP61024 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CKS1BP61024 NPR3-201ENST00000265074 7344 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CKS1BP61024 AC127383.1-201ENST00000444697 1800 ntBASIC10.59□□□□□ -0.71
CKS1BP61024 STK25-235ENST00000543554 2556 ntTSL 2 BASIC10.59□□□□□ -0.71
CKS1BP61024 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CKS1BP61024 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CKS1BP61024 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
CKS1BP61024 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC10.59□□□□□ -0.71
CKS1BP61024 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC10.59□□□□□ -0.71
CKS1BP61024 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC10.59□□□□□ -0.71
CKS1BP61024 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
CKS1BP61024 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CKS1BP61024 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
CKS1BP61024 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC10.59□□□□□ -0.71
CKS1BP61024 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
CKS1BP61024 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC10.59□□□□□ -0.71
CKS1BP61024 GPX1P2-201ENST00000429271 606 ntBASIC10.59□□□□□ -0.71
CKS1BP61024 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC10.59□□□□□ -0.71
CKS1BP61024 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC10.59□□□□□ -0.71
CKS1BP61024 AC098831.1-202ENST00000438821 336 ntBASIC10.59□□□□□ -0.71
CKS1BP61024 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC10.59□□□□□ -0.71
CKS1BP61024 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC10.59□□□□□ -0.71
CKS1BP61024 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC10.59□□□□□ -0.71
CKS1BP61024 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC10.59□□□□□ -0.71
CKS1BP61024 AC098859.1-201ENST00000502915 1238 ntBASIC10.59□□□□□ -0.71
CKS1BP61024 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC10.59□□□□□ -0.71
CKS1BP61024 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC10.59□□□□□ -0.71
CKS1BP61024 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC10.59□□□□□ -0.71
CKS1BP61024 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CKS1BP61024 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC10.59□□□□□ -0.71
CKS1BP61024 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC10.59□□□□□ -0.71
CKS1BP61024 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CKS1BP61024 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CKS1BP61024 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC10.59□□□□□ -0.71
CKS1BP61024 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
CKS1BP61024 DLGAP2-214ENST00000612087 10088 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
CKS1BP61024 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC10.59□□□□□ -0.71
CKS1BP61024 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC10.59□□□□□ -0.71
CKS1BP61024 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CKS1BP61024 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
CKS1BP61024 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
CKS1BP61024 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CKS1BP61024 AL138709.1-201ENST00000614840 1693 ntBASIC10.59□□□□□ -0.71
CKS1BP61024 MDGA1-207ENST00000505425 3021 ntTSL 5 BASIC10.59□□□□□ -0.71
CKS1BP61024 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
CKS1BP61024 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CKS1BP61024 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC10.59□□□□□ -0.71
CKS1BP61024 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CKS1BP61024 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms