Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 FKBP4P6-201ENST00000457486 1332 ntBASIC14.36□□□□□ -0.11
VSX2P58304 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
VSX2P58304 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VSX2P58304 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
VSX2P58304 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VSX2P58304 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
VSX2P58304 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
VSX2P58304 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.36□□□□□ -0.11
VSX2P58304 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
VSX2P58304 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
VSX2P58304 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
VSX2P58304 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
VSX2P58304 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VSX2P58304 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VSX2P58304 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VSX2P58304 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
VSX2P58304 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
VSX2P58304 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.35□□□□□ -0.11
VSX2P58304 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VSX2P58304 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
VSX2P58304 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VSX2P58304 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VSX2P58304 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VSX2P58304 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VSX2P58304 LINC00528-201ENST00000600723 2160 ntBASIC14.35□□□□□ -0.11
VSX2P58304 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VSX2P58304 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VSX2P58304 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VSX2P58304 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VSX2P58304 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
VSX2P58304 MESTP3-201ENST00000503460 968 ntBASIC14.35□□□□□ -0.11
VSX2P58304 COX5BP1-201ENST00000507622 393 ntBASIC14.35□□□□□ -0.11
VSX2P58304 RNA5SP412-201ENST00000516234 123 ntBASIC14.35□□□□□ -0.11
VSX2P58304 AL583810.1-201ENST00000553344 1045 ntBASIC14.35□□□□□ -0.11
VSX2P58304 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.35□□□□□ -0.11
VSX2P58304 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VSX2P58304 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VSX2P58304 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.35□□□□□ -0.11
VSX2P58304 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VSX2P58304 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.35□□□□□ -0.11
VSX2P58304 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
VSX2P58304 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VSX2P58304 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VSX2P58304 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
VSX2P58304 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
VSX2P58304 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VSX2P58304 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VSX2P58304 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VSX2P58304 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.35□□□□□ -0.11
VSX2P58304 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VSX2P58304 OR2I1P-209ENST00000641730 5365 ntBASIC14.35□□□□□ -0.11
VSX2P58304 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VSX2P58304 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VSX2P58304 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.35□□□□□ -0.11
VSX2P58304 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.34□□□□□ -0.11
VSX2P58304 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VSX2P58304 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VSX2P58304 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
VSX2P58304 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VSX2P58304 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VSX2P58304 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
VSX2P58304 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VSX2P58304 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VSX2P58304 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
VSX2P58304 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VSX2P58304 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VSX2P58304 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VSX2P58304 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VSX2P58304 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
VSX2P58304 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.34□□□□□ -0.11
VSX2P58304 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.34□□□□□ -0.11
VSX2P58304 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VSX2P58304 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.34□□□□□ -0.11
VSX2P58304 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VSX2P58304 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
VSX2P58304 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
VSX2P58304 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VSX2P58304 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.34□□□□□ -0.11
VSX2P58304 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.34□□□□□ -0.11
VSX2P58304 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VSX2P58304 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
VSX2P58304 AC106820.3-201ENST00000561653 397 ntBASIC14.34□□□□□ -0.11
VSX2P58304 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.34□□□□□ -0.11
VSX2P58304 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.34□□□□□ -0.11
VSX2P58304 AL033527.4-201ENST00000641026 673 ntBASIC14.34□□□□□ -0.11
VSX2P58304 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VSX2P58304 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
VSX2P58304 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VSX2P58304 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.34□□□□□ -0.11
VSX2P58304 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
VSX2P58304 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.34□□□□□ -0.11
VSX2P58304 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.34□□□□□ -0.11
VSX2P58304 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
VSX2P58304 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.34□□□□□ -0.11
VSX2P58304 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
VSX2P58304 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VSX2P58304 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VSX2P58304 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
VSX2P58304 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VSX2P58304 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms