Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.1■□□□□ 0.01
WNT3AP56704 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.1■□□□□ 0.01
WNT3AP56704 AC244669.2-201ENST00000612320 853 ntBASIC15.1■□□□□ 0.01
WNT3AP56704 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.1■□□□□ 0.01
WNT3AP56704 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.1■□□□□ 0.01
WNT3AP56704 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
WNT3AP56704 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
WNT3AP56704 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
WNT3AP56704 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
WNT3AP56704 AC097376.2-205ENST00000610159 5334 ntBASIC15.1■□□□□ 0.01
WNT3AP56704 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
WNT3AP56704 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.1■□□□□ 0.01
WNT3AP56704 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.1■□□□□ 0.01
WNT3AP56704 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
WNT3AP56704 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
WNT3AP56704 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.1■□□□□ 0.01
WNT3AP56704 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
WNT3AP56704 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
WNT3AP56704 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
WNT3AP56704 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.1■□□□□ 0.01
WNT3AP56704 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.1■□□□□ 0.01
WNT3AP56704 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
WNT3AP56704 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
WNT3AP56704 AL136172.1-201ENST00000598590 1394 ntBASIC15.1■□□□□ 0.01
WNT3AP56704 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.1■□□□□ 0.01
WNT3AP56704 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.09■□□□□ 0.01
WNT3AP56704 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.09■□□□□ 0.01
WNT3AP56704 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
WNT3AP56704 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
WNT3AP56704 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
WNT3AP56704 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
WNT3AP56704 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
WNT3AP56704 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
WNT3AP56704 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
WNT3AP56704 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.09■□□□□ 0.01
WNT3AP56704 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
WNT3AP56704 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
WNT3AP56704 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
WNT3AP56704 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.09■□□□□ 0.01
WNT3AP56704 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
WNT3AP56704 AC007551.1-201ENST00000457394 519 ntBASIC15.09■□□□□ 0.01
WNT3AP56704 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
WNT3AP56704 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.09■□□□□ 0.01
WNT3AP56704 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.09■□□□□ 0.01
WNT3AP56704 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.09■□□□□ 0.01
WNT3AP56704 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
WNT3AP56704 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.09■□□□□ 0.01
WNT3AP56704 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.09■□□□□ 0.01
WNT3AP56704 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
WNT3AP56704 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.09■□□□□ 0.01
WNT3AP56704 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
WNT3AP56704 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
WNT3AP56704 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
WNT3AP56704 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
WNT3AP56704 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.09■□□□□ 0.01
WNT3AP56704 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
WNT3AP56704 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
WNT3AP56704 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.09■□□□□ 0.01
WNT3AP56704 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
WNT3AP56704 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
WNT3AP56704 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
WNT3AP56704 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
WNT3AP56704 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
WNT3AP56704 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
WNT3AP56704 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
WNT3AP56704 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
WNT3AP56704 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
WNT3AP56704 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
WNT3AP56704 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.08■□□□□ 0.01
WNT3AP56704 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
WNT3AP56704 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
WNT3AP56704 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.08■□□□□ 0.01
WNT3AP56704 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
WNT3AP56704 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.08■□□□□ 0
WNT3AP56704 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
WNT3AP56704 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
WNT3AP56704 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
WNT3AP56704 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.08■□□□□ 0
WNT3AP56704 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
WNT3AP56704 BX640514.1-201ENST00000583223 1918 ntBASIC15.08■□□□□ 0
WNT3AP56704 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.08■□□□□ 0
WNT3AP56704 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
WNT3AP56704 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.08■□□□□ 0
WNT3AP56704 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.08■□□□□ 0
WNT3AP56704 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.08■□□□□ 0
WNT3AP56704 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.08■□□□□ 0
WNT3AP56704 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.08■□□□□ 0
WNT3AP56704 TPT1P11-201ENST00000458482 498 ntBASIC15.08■□□□□ 0
WNT3AP56704 GCOM2-201ENST00000509133 1104 ntBASIC15.08■□□□□ 0
WNT3AP56704 AC022447.6-201ENST00000515522 438 ntBASIC15.08■□□□□ 0
WNT3AP56704 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
WNT3AP56704 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.08■□□□□ 0
WNT3AP56704 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.08■□□□□ 0
WNT3AP56704 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
WNT3AP56704 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.08■□□□□ 0
WNT3AP56704 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.08■□□□□ 0
WNT3AP56704 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
WNT3AP56704 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
WNT3AP56704 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.08■□□□□ 0
WNT3AP56704 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms