Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GTF2A1P52655 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.71□□□□□ -0.05
GTF2A1P52655 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
GTF2A1P52655 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GTF2A1P52655 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC14.71□□□□□ -0.05
GTF2A1P52655 EPN3-201ENST00000268933 4071 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
GTF2A1P52655 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GTF2A1P52655 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GTF2A1P52655 CPA5-208ENST00000485477 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GTF2A1P52655 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
GTF2A1P52655 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
GTF2A1P52655 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GTF2A1P52655 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.71□□□□□ -0.05
GTF2A1P52655 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.71□□□□□ -0.05
GTF2A1P52655 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
GTF2A1P52655 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
GTF2A1P52655 DRAXINP1-201ENST00000437611 948 ntBASIC14.71□□□□□ -0.05
GTF2A1P52655 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.71□□□□□ -0.05
GTF2A1P52655 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.71□□□□□ -0.05
GTF2A1P52655 ABCD1P5-201ENST00000445663 754 ntBASIC14.71□□□□□ -0.05
GTF2A1P52655 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.71□□□□□ -0.05
GTF2A1P52655 LTBR-211ENST00000543190 785 ntTSL 3 BASIC14.71□□□□□ -0.05
GTF2A1P52655 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.71□□□□□ -0.05
GTF2A1P52655 MIR4492-201ENST00000581627 80 ntBASIC14.71□□□□□ -0.05
GTF2A1P52655 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC14.71□□□□□ -0.05
GTF2A1P52655 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.71□□□□□ -0.05
GTF2A1P52655 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC14.71□□□□□ -0.05
GTF2A1P52655 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GTF2A1P52655 TMEM199-201ENST00000292114 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GTF2A1P52655 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GTF2A1P52655 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
GTF2A1P52655 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
GTF2A1P52655 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
GTF2A1P52655 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC14.71□□□□□ -0.05
GTF2A1P52655 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
GTF2A1P52655 SNIP1-201ENST00000296215 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
GTF2A1P52655 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC14.71□□□□□ -0.06
GTF2A1P52655 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
GTF2A1P52655 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
GTF2A1P52655 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
GTF2A1P52655 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
GTF2A1P52655 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
GTF2A1P52655 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
GTF2A1P52655 ANXA8-205ENST00000585281 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
GTF2A1P52655 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
GTF2A1P52655 AC008806.1-201ENST00000624962 2443 ntBASIC14.71□□□□□ -0.06
GTF2A1P52655 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC14.71□□□□□ -0.06
GTF2A1P52655 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
GTF2A1P52655 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GTF2A1P52655 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GTF2A1P52655 CCT7P1-201ENST00000406551 1611 ntBASIC14.7□□□□□ -0.06
GTF2A1P52655 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GTF2A1P52655 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GTF2A1P52655 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GTF2A1P52655 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.7□□□□□ -0.06
GTF2A1P52655 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
GTF2A1P52655 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GTF2A1P52655 AC005332.1-201ENST00000577698 1310 ntBASIC14.7□□□□□ -0.06
GTF2A1P52655 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GTF2A1P52655 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
GTF2A1P52655 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
GTF2A1P52655 PARN-203ENST00000437198 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GTF2A1P52655 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
GTF2A1P52655 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GTF2A1P52655 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GTF2A1P52655 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC14.7□□□□□ -0.06
GTF2A1P52655 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GTF2A1P52655 INE2-201ENST00000630399 1874 ntBASIC14.7□□□□□ -0.06
GTF2A1P52655 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
GTF2A1P52655 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
GTF2A1P52655 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC14.7□□□□□ -0.06
GTF2A1P52655 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
GTF2A1P52655 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.7□□□□□ -0.06
GTF2A1P52655 TLE3-208ENST00000557907 2295 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GTF2A1P52655 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
GTF2A1P52655 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GTF2A1P52655 HAUS4P1-201ENST00000406739 1145 ntBASIC14.7□□□□□ -0.06
GTF2A1P52655 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GTF2A1P52655 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GTF2A1P52655 AP002383.4-201ENST00000442518 975 ntBASIC14.7□□□□□ -0.06
GTF2A1P52655 TSSC2-201ENST00000450217 709 ntBASIC14.7□□□□□ -0.06
GTF2A1P52655 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC14.7□□□□□ -0.06
GTF2A1P52655 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
GTF2A1P52655 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.7□□□□□ -0.06
GTF2A1P52655 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.7□□□□□ -0.06
GTF2A1P52655 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.7□□□□□ -0.06
GTF2A1P52655 MPDU1-223ENST00000582151 728 ntBASIC14.7□□□□□ -0.06
GTF2A1P52655 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.7□□□□□ -0.06
GTF2A1P52655 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
GTF2A1P52655 AC064862.7-201ENST00000604520 867 ntBASIC14.7□□□□□ -0.06
GTF2A1P52655 AL590326.2-201ENST00000625139 305 ntBASIC14.7□□□□□ -0.06
GTF2A1P52655 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.7□□□□□ -0.06
GTF2A1P52655 ALDH18A1-202ENST00000371224 3359 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
GTF2A1P52655 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
GTF2A1P52655 POPDC2-208ENST00000493094 1837 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
GTF2A1P52655 MCU-204ENST00000536019 3224 ntTSL 2 BASIC14.7□□□□□ -0.06
GTF2A1P52655 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GTF2A1P52655 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.7□□□□□ -0.06
GTF2A1P52655 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GTF2A1P52655 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms