Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RPL5P21-201ENST00000404620 815 ntBASIC16.22■□□□□ 0.19
HTTP42858 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC16.22■□□□□ 0.19
HTTP42858 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC16.22■□□□□ 0.19
HTTP42858 LINC00244-201ENST00000625073 613 ntBASIC16.22■□□□□ 0.19
HTTP42858 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HTTP42858 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HTTP42858 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.22■□□□□ 0.19
HTTP42858 AC132872.4-202ENST00000622924 2756 ntBASIC16.22■□□□□ 0.19
HTTP42858 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.22■□□□□ 0.19
HTTP42858 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.21■□□□□ 0.19
HTTP42858 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HTTP42858 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
HTTP42858 BX088651.3-201ENST00000418155 352 ntBASIC16.21■□□□□ 0.19
HTTP42858 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HTTP42858 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC16.21■□□□□ 0.19
HTTP42858 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
HTTP42858 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HTTP42858 HNRNPA1P5-201ENST00000558213 966 ntBASIC16.21■□□□□ 0.19
HTTP42858 COQ4-204ENST00000608951 781 ntTSL 2 BASIC16.21■□□□□ 0.19
HTTP42858 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HTTP42858 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HTTP42858 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HTTP42858 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.21■□□□□ 0.19
HTTP42858 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HTTP42858 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HTTP42858 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC16.21■□□□□ 0.19
HTTP42858 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.21■□□□□ 0.19
HTTP42858 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
HTTP42858 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HTTP42858 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HTTP42858 PAUPAR-201ENST00000630360 2965 ntBASIC16.21■□□□□ 0.19
HTTP42858 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.21■□□□□ 0.19
HTTP42858 RHOQP2-201ENST00000449922 579 ntBASIC16.21■□□□□ 0.19
HTTP42858 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HTTP42858 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC16.21■□□□□ 0.19
HTTP42858 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HTTP42858 AP003040.1-201ENST00000532044 1024 ntBASIC16.21■□□□□ 0.19
HTTP42858 AL591424.3-201ENST00000614278 872 ntBASIC16.21■□□□□ 0.19
HTTP42858 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC16.21■□□□□ 0.19
HTTP42858 AC139713.2-207ENST00000641556 1292 ntBASIC16.21■□□□□ 0.19
HTTP42858 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HTTP42858 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HTTP42858 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HTTP42858 AC117503.4-201ENST00000623229 1418 ntBASIC16.21■□□□□ 0.19
HTTP42858 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC16.21■□□□□ 0.19
HTTP42858 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.21■□□□□ 0.19
HTTP42858 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HTTP42858 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.21■□□□□ 0.18
HTTP42858 OR52M2P-201ENST00000414298 959 ntBASIC16.21■□□□□ 0.18
HTTP42858 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
HTTP42858 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC16.21■□□□□ 0.18
HTTP42858 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC16.21■□□□□ 0.18
HTTP42858 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC16.21■□□□□ 0.18
HTTP42858 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC16.21■□□□□ 0.18
HTTP42858 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC16.21■□□□□ 0.18
HTTP42858 AC005274.1-201ENST00000623460 802 ntBASIC16.21■□□□□ 0.18
HTTP42858 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
HTTP42858 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
HTTP42858 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.21■□□□□ 0.18
HTTP42858 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.21■□□□□ 0.18
HTTP42858 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.21■□□□□ 0.18
HTTP42858 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HTTP42858 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.2■□□□□ 0.18
HTTP42858 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HTTP42858 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HTTP42858 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HTTP42858 AC099398.1-201ENST00000567919 2776 ntBASIC16.2■□□□□ 0.18
HTTP42858 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.2■□□□□ 0.18
HTTP42858 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC16.2■□□□□ 0.18
HTTP42858 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC16.2■□□□□ 0.18
HTTP42858 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC16.2■□□□□ 0.18
HTTP42858 BMF-206ENST00000558774 671 ntTSL 3 BASIC16.2■□□□□ 0.18
HTTP42858 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HTTP42858 AC136621.1-201ENST00000624017 2304 ntBASIC16.2■□□□□ 0.18
HTTP42858 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HTTP42858 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HTTP42858 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.2■□□□□ 0.18
HTTP42858 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC16.2■□□□□ 0.18
HTTP42858 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HTTP42858 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HTTP42858 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
HTTP42858 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HTTP42858 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
HTTP42858 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC16.2■□□□□ 0.18
HTTP42858 AC087203.1-201ENST00000532111 1181 ntBASIC16.2■□□□□ 0.18
HTTP42858 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC16.2■□□□□ 0.18
HTTP42858 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC16.2■□□□□ 0.18
HTTP42858 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HTTP42858 AC087481.3-201ENST00000602886 1894 ntBASIC16.2■□□□□ 0.18
HTTP42858 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HTTP42858 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC16.2■□□□□ 0.18
HTTP42858 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC16.2■□□□□ 0.18
HTTP42858 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HTTP42858 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HTTP42858 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HTTP42858 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.2■□□□□ 0.18
HTTP42858 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.2■□□□□ 0.18
HTTP42858 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC16.2■□□□□ 0.18
HTTP42858 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC16.19■□□□□ 0.18
HTTP42858 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms