Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 AC006548.2-201ENST00000605217 529 ntBASIC21.72■■□□□ 1.07
KDM5CP41229 AL139339.2-201ENST00000608063 657 ntBASIC21.72■■□□□ 1.07
KDM5CP41229 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
KDM5CP41229 LINC00244-201ENST00000625073 613 ntBASIC21.72■■□□□ 1.07
KDM5CP41229 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC21.72■■□□□ 1.07
KDM5CP41229 AP003680.1-201ENST00000598970 3660 ntBASIC21.72■■□□□ 1.07
KDM5CP41229 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KDM5CP41229 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KDM5CP41229 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KDM5CP41229 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KDM5CP41229 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC21.72■■□□□ 1.07
KDM5CP41229 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KDM5CP41229 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
KDM5CP41229 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KDM5CP41229 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
KDM5CP41229 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
KDM5CP41229 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
KDM5CP41229 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
KDM5CP41229 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KDM5CP41229 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KDM5CP41229 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
KDM5CP41229 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KDM5CP41229 AL357373.1-201ENST00000394974 322 ntBASIC21.71■■□□□ 1.07
KDM5CP41229 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KDM5CP41229 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
KDM5CP41229 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC21.71■■□□□ 1.07
KDM5CP41229 COX5A-205ENST00000568517 582 ntTSL 3 BASIC21.71■■□□□ 1.07
KDM5CP41229 CYP4F36P-201ENST00000589193 186 ntBASIC21.71■■□□□ 1.07
KDM5CP41229 AL627230.2-201ENST00000613254 655 ntBASIC21.71■■□□□ 1.07
KDM5CP41229 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KDM5CP41229 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KDM5CP41229 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KDM5CP41229 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
KDM5CP41229 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KDM5CP41229 WASH3P-207ENST00000560956 1394 ntBASIC21.71■■□□□ 1.07
KDM5CP41229 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC21.71■■□□□ 1.07
KDM5CP41229 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
KDM5CP41229 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC21.71■■□□□ 1.07
KDM5CP41229 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
KDM5CP41229 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC21.71■■□□□ 1.07
KDM5CP41229 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
KDM5CP41229 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
KDM5CP41229 AC104640.1-201ENST00000562617 2109 ntBASIC21.71■■□□□ 1.07
KDM5CP41229 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
KDM5CP41229 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
KDM5CP41229 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC21.71■■□□□ 1.07
KDM5CP41229 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
KDM5CP41229 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KDM5CP41229 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC21.7■■□□□ 1.07
KDM5CP41229 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC21.7■■□□□ 1.06
KDM5CP41229 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
KDM5CP41229 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
KDM5CP41229 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
KDM5CP41229 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC21.7■■□□□ 1.06
KDM5CP41229 AC006529.1-201ENST00000459978 637 ntBASIC21.7■■□□□ 1.06
KDM5CP41229 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC21.7■■□□□ 1.06
KDM5CP41229 RNA5SP406-201ENST00000516106 112 ntBASIC21.7■■□□□ 1.06
KDM5CP41229 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC21.7■■□□□ 1.06
KDM5CP41229 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
KDM5CP41229 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
KDM5CP41229 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC21.7■■□□□ 1.06
KDM5CP41229 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC21.7■■□□□ 1.06
KDM5CP41229 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDM5CP41229 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
KDM5CP41229 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDM5CP41229 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDM5CP41229 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
KDM5CP41229 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
KDM5CP41229 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC21.7■■□□□ 1.06
KDM5CP41229 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
KDM5CP41229 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC21.7■■□□□ 1.06
KDM5CP41229 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDM5CP41229 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDM5CP41229 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDM5CP41229 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC21.7■■□□□ 1.06
KDM5CP41229 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDM5CP41229 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDM5CP41229 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDM5CP41229 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
KDM5CP41229 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDM5CP41229 MIR566-201ENST00000385187 94 ntBASIC21.7■■□□□ 1.06
KDM5CP41229 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC21.7■■□□□ 1.06
KDM5CP41229 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC21.7■■□□□ 1.06
KDM5CP41229 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC21.7■■□□□ 1.06
KDM5CP41229 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC21.7■■□□□ 1.06
KDM5CP41229 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC21.7■■□□□ 1.06
KDM5CP41229 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
KDM5CP41229 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC21.7■■□□□ 1.06
KDM5CP41229 AC008972.2-201ENST00000606587 494 ntBASIC21.7■■□□□ 1.06
KDM5CP41229 MME-218ENST00000625667 363 ntTSL 5 BASIC21.7■■□□□ 1.06
KDM5CP41229 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDM5CP41229 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KDM5CP41229 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC21.69■■□□□ 1.06
KDM5CP41229 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC21.69■■□□□ 1.06
KDM5CP41229 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC21.69■■□□□ 1.06
KDM5CP41229 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KDM5CP41229 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
KDM5CP41229 AC126177.1-201ENST00000547829 2218 ntBASIC21.69■■□□□ 1.06
KDM5CP41229 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KDM5CP41229 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms