Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
USP8P40818 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
USP8P40818 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
USP8P40818 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
USP8P40818 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.4■□□□□ 0.22
USP8P40818 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
USP8P40818 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.4■□□□□ 0.22
USP8P40818 AC134915.1-201ENST00000426461 574 ntBASIC16.4■□□□□ 0.22
USP8P40818 AC123567.1-201ENST00000548294 1261 ntBASIC16.4■□□□□ 0.22
USP8P40818 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.4■□□□□ 0.22
USP8P40818 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.4■□□□□ 0.22
USP8P40818 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.4■□□□□ 0.22
USP8P40818 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.4■□□□□ 0.22
USP8P40818 RRP7BP-205ENST00000566851 833 ntBASIC16.4■□□□□ 0.22
USP8P40818 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.4■□□□□ 0.22
USP8P40818 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.4■□□□□ 0.22
USP8P40818 LINC02560-201ENST00000596379 459 ntBASIC16.4■□□□□ 0.22
USP8P40818 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.4■□□□□ 0.22
USP8P40818 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
USP8P40818 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.4■□□□□ 0.22
USP8P40818 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
USP8P40818 AL158070.2-201ENST00000623713 1621 ntBASIC16.4■□□□□ 0.22
USP8P40818 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
USP8P40818 AL360270.3-201ENST00000609118 1348 ntBASIC16.4■□□□□ 0.22
USP8P40818 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.4■□□□□ 0.22
USP8P40818 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
USP8P40818 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
USP8P40818 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
USP8P40818 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
USP8P40818 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
USP8P40818 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
USP8P40818 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP8P40818 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
USP8P40818 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP8P40818 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
USP8P40818 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC16.39■□□□□ 0.21
USP8P40818 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.39■□□□□ 0.21
USP8P40818 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.39■□□□□ 0.21
USP8P40818 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.39■□□□□ 0.21
USP8P40818 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP8P40818 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP8P40818 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP8P40818 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP8P40818 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.39■□□□□ 0.21
USP8P40818 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP8P40818 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
USP8P40818 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP8P40818 AC236430.1-201ENST00000402231 743 ntBASIC16.39■□□□□ 0.21
USP8P40818 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP8P40818 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.39■□□□□ 0.21
USP8P40818 DFFBP1-201ENST00000433250 979 ntBASIC16.39■□□□□ 0.21
USP8P40818 BCRP1-201ENST00000444246 691 ntBASIC16.39■□□□□ 0.21
USP8P40818 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.39■□□□□ 0.21
USP8P40818 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.39■□□□□ 0.21
USP8P40818 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.39■□□□□ 0.21
USP8P40818 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.39■□□□□ 0.21
USP8P40818 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.39■□□□□ 0.21
USP8P40818 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.39■□□□□ 0.21
USP8P40818 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.39■□□□□ 0.21
USP8P40818 AC093726.1-201ENST00000608064 963 ntBASIC16.39■□□□□ 0.21
USP8P40818 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.39■□□□□ 0.21
USP8P40818 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.39■□□□□ 0.21
USP8P40818 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.39■□□□□ 0.21
USP8P40818 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.39■□□□□ 0.21
USP8P40818 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.39■□□□□ 0.21
USP8P40818 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP8P40818 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
USP8P40818 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP8P40818 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.39■□□□□ 0.21
USP8P40818 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
USP8P40818 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP8P40818 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP8P40818 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC16.39■□□□□ 0.21
USP8P40818 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.39■□□□□ 0.21
USP8P40818 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP8P40818 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP8P40818 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
USP8P40818 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP8P40818 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
USP8P40818 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.39■□□□□ 0.21
USP8P40818 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
USP8P40818 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
USP8P40818 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
USP8P40818 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
USP8P40818 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC16.38■□□□□ 0.21
USP8P40818 AC117489.1-201ENST00000625169 3217 ntBASIC16.38■□□□□ 0.21
USP8P40818 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
USP8P40818 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
USP8P40818 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.38■□□□□ 0.21
USP8P40818 INTS4P2-202ENST00000614726 2019 ntBASIC16.38■□□□□ 0.21
USP8P40818 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.38■□□□□ 0.21
USP8P40818 AC018529.2-202ENST00000611482 3087 ntBASIC16.38■□□□□ 0.21
USP8P40818 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
USP8P40818 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
USP8P40818 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
USP8P40818 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
USP8P40818 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
USP8P40818 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
USP8P40818 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
USP8P40818 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms