Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.17■□□□□ 0.02
RPA3P35244 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RPA3P35244 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPA3P35244 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPA3P35244 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.17■□□□□ 0.02
RPA3P35244 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPA3P35244 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.17■□□□□ 0.02
RPA3P35244 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.17■□□□□ 0.02
RPA3P35244 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RPA3P35244 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RPA3P35244 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RPA3P35244 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.17■□□□□ 0.02
RPA3P35244 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPA3P35244 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.17■□□□□ 0.02
RPA3P35244 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RPA3P35244 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPA3P35244 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.17■□□□□ 0.02
RPA3P35244 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RPA3P35244 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.17■□□□□ 0.02
RPA3P35244 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPA3P35244 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RPA3P35244 AL121723.1-201ENST00000445194 1519 ntBASIC15.17■□□□□ 0.02
RPA3P35244 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.17■□□□□ 0.02
RPA3P35244 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPA3P35244 AC105206.1-202ENST00000314927 2368 ntBASIC15.17■□□□□ 0.02
RPA3P35244 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPA3P35244 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPA3P35244 AL360270.3-201ENST00000609118 1348 ntBASIC15.17■□□□□ 0.02
RPA3P35244 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.17■□□□□ 0.02
RPA3P35244 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.16■□□□□ 0.02
RPA3P35244 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.16■□□□□ 0.02
RPA3P35244 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
RPA3P35244 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RPA3P35244 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.16■□□□□ 0.02
RPA3P35244 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPA3P35244 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPA3P35244 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPA3P35244 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RPA3P35244 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RPA3P35244 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.16■□□□□ 0.02
RPA3P35244 AC018665.1-201ENST00000622927 1362 ntBASIC15.16■□□□□ 0.02
RPA3P35244 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPA3P35244 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.16■□□□□ 0.02
RPA3P35244 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RPA3P35244 SPDYE19P-201ENST00000338590 713 ntBASIC15.16■□□□□ 0.02
RPA3P35244 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPA3P35244 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.16■□□□□ 0.02
RPA3P35244 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.16■□□□□ 0.02
RPA3P35244 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.16■□□□□ 0.02
RPA3P35244 FAM207CP-201ENST00000443486 507 ntBASIC15.16■□□□□ 0.02
RPA3P35244 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.16■□□□□ 0.02
RPA3P35244 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.16■□□□□ 0.02
RPA3P35244 MIR4745-201ENST00000577608 62 ntBASIC15.16■□□□□ 0.02
RPA3P35244 AC004233.3-201ENST00000607794 1269 ntBASIC15.16■□□□□ 0.02
RPA3P35244 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.16■□□□□ 0.02
RPA3P35244 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.16■□□□□ 0.02
RPA3P35244 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.16■□□□□ 0.02
RPA3P35244 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.16■□□□□ 0.02
RPA3P35244 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RPA3P35244 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC15.16■□□□□ 0.02
RPA3P35244 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RPA3P35244 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RPA3P35244 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPA3P35244 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
RPA3P35244 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RPA3P35244 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RPA3P35244 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RPA3P35244 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
RPA3P35244 CICP20-201ENST00000443330 2801 ntBASIC15.16■□□□□ 0.02
RPA3P35244 CICP8-201ENST00000455800 2813 ntBASIC15.16■□□□□ 0.02
RPA3P35244 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.16■□□□□ 0.02
RPA3P35244 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPA3P35244 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RPA3P35244 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPA3P35244 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.15■□□□□ 0.02
RPA3P35244 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPA3P35244 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPA3P35244 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RPA3P35244 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPA3P35244 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPA3P35244 AC130686.1-201ENST00000622936 2466 ntBASIC15.15■□□□□ 0.02
RPA3P35244 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPA3P35244 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPA3P35244 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPA3P35244 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPA3P35244 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPA3P35244 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RPA3P35244 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RPA3P35244 TOMM22P5-201ENST00000416399 439 ntBASIC15.15■□□□□ 0.02
RPA3P35244 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.15■□□□□ 0.02
RPA3P35244 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.15■□□□□ 0.02
RPA3P35244 AL589987.1-201ENST00000453380 819 ntBASIC15.15■□□□□ 0.02
RPA3P35244 KRT18P43-201ENST00000469825 1281 ntBASIC15.15■□□□□ 0.02
RPA3P35244 SERBP1P5-201ENST00000510079 1181 ntBASIC15.15■□□□□ 0.02
RPA3P35244 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.15■□□□□ 0.02
RPA3P35244 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.15■□□□□ 0.02
RPA3P35244 TPRX2P-201ENST00000535362 881 ntBASIC15.15■□□□□ 0.02
RPA3P35244 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RPA3P35244 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPA3P35244 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms